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The map label for this gene is ftsY [H]

Identifier: 89053705

GI number: 89053705

Start: 1174022

End: 1175167

Strand: Direct

Name: ftsY [H]

Synonym: Jann_1214

Alternate gene names: 89053705

Gene position: 1174022-1175167 (Clockwise)

Preceding gene: 89053703

Following gene: 89053706

Centisome position: 27.19

GC content: 65.1

Gene sequence:

>1146_bases
ATGTTTAAATCCTCGTCGAAACTGGACGAGGGGCTGGATGCGATCATTGAAGACGGGGCTGCGGATGCGGCGCCTGCGCC
CGAGGCCCCGACGCCTGCGCCGGAGTTGGCCCGAACCCCTGAGCCCGAACCCGCGCGCGAGACGGCGCCGGAGCCTGCAC
CACCCCTGCCGGAACCAGAGCCCACCCCTATTGCGGAGGGTCCGGTGGCCGCGCCGACACCACTGCCAGCCGCTACCCCC
GCCACAGAGCCTGAGCCGGCGGCCAAGCCGGGGCTGTTTGGCCGTCTCCTGGGGCGCTCCTCCGAGCCCAAGCGCGCTTT
GGACGACGACATGTTGGAACAGCTGGAAGAGCTGCTGATCGCCTCGGATATGGGCGTGGACATTGCGCTGCGTGTGACCG
CCAACATGGCCGAGGGGCGCTATGGCAAGATGCTGTCGGCCACGGAAATCAAGGAGTTGCTGGCCTCCGAGATCACGCGC
GTGATGGAGCCTGTCGCGCGACCCCTGCCGATCTACCCGAAGACGCCACAGGTGGTGCTGGTCGTGGGCGTCAATGGCTC
GGGCAAGACGACGACCATTGGCAAACTCTCCAGCCAGTTCCGGGCGGCTGGCAAAAAGGTGGTGATCGCCGCAGGTGACA
CGTTCCGCGCCGCCGCCGTGGAGCAGTTGCAGGTCTGGGGCGACCGCGCGGGCGTGCCCGTATTGACCGCGCCCGAGGGC
TCCGACCCCGCCGCGCTGGCCTATGATGCCATGGTCAAGGCGGAAGCCGATGGCGCGGATCTTCTGATGATCGACACCGC
AGGCCGCCTTCAAAATCGCGCCGATCTGATGGAGGAACTGGCCAAGATCGTGCGTGTCATTCGCAAGAAAGACCCCGATG
CGCCGCACAACACGTTGTTGGTCCTTGACGCCACGACCGGACAGAACGCGCTTCGTCAGGTTGAGCTGTTTGGGCAGATG
GCGGATGTGTCGGGCCTGGTGATGACCAAGCTGGACGGCACCGCAAAGGGGGGCGTCCTGGTCGCGCTGGCGGACAAGTT
CGGGCTTCCGATCCATGCCATCGGCGTTGGTGAGCAGATTGATGATCTGCAACCTTTCGATCCCGAAGAATTTGCCGATG
CCCTTGTTGGGCTTGATCGTTCCTGA

Upstream 100 bases:

>100_bases
AACGCTGCGGCCTTTCCAAGCGCGCCGTGGGGTATTAGGTGGGTTTGGAGAGACCAACCACAGGGTGCCCATGTCCTTTT
TCCGCAAAATGAAGGATCGG

Downstream 100 bases:

>100_bases
TGCTTATCCACACGCCTTGTGGATAGAATGAGTGCTTGGATCACCTCCATCGAAGGGACGCCAGCGGGGGCGCAGGCGGC
CCTGATCCTGGCGCTGTCGG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MFKSSSKLDEGLDAIIEDGAADAAPAPEAPTPAPELARTPEPEPARETAPEPAPPLPEPEPTPIAEGPVAAPTPLPAATP
ATEPEPAAKPGLFGRLLGRSSEPKRALDDDMLEQLEELLIASDMGVDIALRVTANMAEGRYGKMLSATEIKELLASEITR
VMEPVARPLPIYPKTPQVVLVVGVNGSGKTTTIGKLSSQFRAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEG
SDPAALAYDAMVKAEADGADLLMIDTAGRLQNRADLMEELAKIVRVIRKKDPDAPHNTLLVLDATTGQNALRQVELFGQM
ADVSGLVMTKLDGTAKGGVLVALADKFGLPIHAIGVGEQIDDLQPFDPEEFADALVGLDRS

Sequences:

>Translated_381_residues
MFKSSSKLDEGLDAIIEDGAADAAPAPEAPTPAPELARTPEPEPARETAPEPAPPLPEPEPTPIAEGPVAAPTPLPAATP
ATEPEPAAKPGLFGRLLGRSSEPKRALDDDMLEQLEELLIASDMGVDIALRVTANMAEGRYGKMLSATEIKELLASEITR
VMEPVARPLPIYPKTPQVVLVVGVNGSGKTTTIGKLSSQFRAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEG
SDPAALAYDAMVKAEADGADLLMIDTAGRLQNRADLMEELAKIVRVIRKKDPDAPHNTLLVLDATTGQNALRQVELFGQM
ADVSGLVMTKLDGTAKGGVLVALADKFGLPIHAIGVGEQIDDLQPFDPEEFADALVGLDRS
>Mature_381_residues
MFKSSSKLDEGLDAIIEDGAADAAPAPEAPTPAPELARTPEPEPARETAPEPAPPLPEPEPTPIAEGPVAAPTPLPAATP
ATEPEPAAKPGLFGRLLGRSSEPKRALDDDMLEQLEELLIASDMGVDIALRVTANMAEGRYGKMLSATEIKELLASEITR
VMEPVARPLPIYPKTPQVVLVVGVNGSGKTTTIGKLSSQFRAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEG
SDPAALAYDAMVKAEADGADLLMIDTAGRLQNRADLMEELAKIVRVIRKKDPDAPHNTLLVLDATTGQNALRQVELFGQM
ADVSGLVMTKLDGTAKGGVLVALADKFGLPIHAIGVGEQIDDLQPFDPEEFADALVGLDRS

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=31.8777292576419, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4507215, Length=277, Percent_Identity=29.2418772563177, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI295424842, Length=340, Percent_Identity=29.4117647058824, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI23308697, Length=340, Percent_Identity=29.4117647058824, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=33.5766423357664, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1789874, Length=314, Percent_Identity=48.4076433121019, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1788963, Length=295, Percent_Identity=29.8305084745763, Blast_Score=134, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17539958, Length=287, Percent_Identity=29.9651567944251, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=310, Percent_Identity=30.3225806451613, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=282, Percent_Identity=30.1418439716312, Blast_Score=146, Evalue=6e-36,
Organism=Drosophila melanogaster, GI17647949, Length=275, Percent_Identity=29.4545454545455, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=29.2358803986711, Blast_Score=108, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 39936; Mature: 39936

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSSSKLDEGLDAIIEDGAADAAPAPEAPTPAPELARTPEPEPARETAPEPAPPLPEPE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCC
PTPIAEGPVAAPTPLPAATPATEPEPAAKPGLFGRLLGRSSEPKRALDDDMLEQLEELLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ASDMGVDIALRVTANMAEGRYGKMLSATEIKELLASEITRVMEPVARPLPIYPKTPQVVL
HHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VVGVNGSGKTTTIGKLSSQFRAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEG
EEEECCCCCEEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCC
SDPAALAYDAMVKAEADGADLLMIDTAGRLQNRADLMEELAKIVRVIRKKDPDAPHNTLL
CCCCHHHHHHHHEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VLDATTGQNALRQVELFGQMADVSGLVMTKLDGTAKGGVLVALADKFGLPIHAIGVGEQI
EEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCC
DDLQPFDPEEFADALVGLDRS
CCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MFKSSSKLDEGLDAIIEDGAADAAPAPEAPTPAPELARTPEPEPARETAPEPAPPLPEPE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCC
PTPIAEGPVAAPTPLPAATPATEPEPAAKPGLFGRLLGRSSEPKRALDDDMLEQLEELLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ASDMGVDIALRVTANMAEGRYGKMLSATEIKELLASEITRVMEPVARPLPIYPKTPQVVL
HHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VVGVNGSGKTTTIGKLSSQFRAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEG
EEEECCCCCEEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCC
SDPAALAYDAMVKAEADGADLLMIDTAGRLQNRADLMEELAKIVRVIRKKDPDAPHNTLL
CCCCHHHHHHHHEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VLDATTGQNALRQVELFGQMADVSGLVMTKLDGTAKGGVLVALADKFGLPIHAIGVGEQI
EEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCC
DDLQPFDPEEFADALVGLDRS
CCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]