| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ispZ [H]
Identifier: 89053707
GI number: 89053707
Start: 1176107
End: 1176733
Strand: Direct
Name: ispZ [H]
Synonym: Jann_1216
Alternate gene names: 89053707
Gene position: 1176107-1176733 (Clockwise)
Preceding gene: 89053706
Following gene: 89053709
Centisome position: 27.24
GC content: 55.98
Gene sequence:
>627_bases ATGGCCGAGAAGCAAATAAACCCGTGGCTGAAGAATGGCTTGGAACTGGGCCCGCCGATCCTATTCTTCATCGCATACCT GTACTTGCAGGAAAAAACCGTCACTGTGGGCGGCACGGATTATGACGGCTTCATCCTGGCCACGGCGCTGTTCGTGCCGA TCCTTTTGGCCTCCACGGCAATCTTGTGGAAGCTGACGGGTGTCATCTCCCGCATTCAGGTCTTCACCGCGATTTTGGTG GTGTTTTTTGGCGCGCTGACGATCTGGTTCAACGACGATCGTTTTTTCAAGATGAAGACATCAATCGTATACGCGTTCTT CGCGATCATGCTTGGGATCGGGCTGGCGCGTGGGCAATCCTATCTCAAATATTTGATGGGGGACCGATTGCCGATGGCGG ATGAGGGCTGGATGATCATGACCAAACGCCTCGCTCTGGCCTTTGTGGCCATGGGTGTCACCAATGAGGTCGTCTGGCGG ACCCAGTCGGACCAGTTTTGGGTGACGTTCGAGACGTTTGCCCTCCCGGCCTTCCTGTTCGTGGTCTTCATGTCACAAGC GCCCCTGATCGAGCGGTTCAGTCTTTCCGACGAGGAGGACGACCAGACCCCCGGCGATCCGACCTAA
Upstream 100 bases:
>100_bases GCTGTTCCTGCGTGAACCGGTCGGGCCCGCCCGCGCGGCTTTGATGGGTTTGATCGCGCTCGGTGCGGTGATAGTGGAAG CCGGAGGATAGGAGCGCGCA
Downstream 100 bases:
>100_bases CCGCACCGCTTGGCTTGCCCCGAGGGGCCAACCGTTCACCGCTTTTCCGGGCGTCCGGCGCCTTGCGACGCTTGCCTTTG AATGCTGGCTTGGCCTTCGG
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAEKQINPWLKNGLELGPPILFFIAYLYLQEKTVTVGGTDYDGFILATALFVPILLASTAILWKLTGVISRIQVFTAILV VFFGALTIWFNDDRFFKMKTSIVYAFFAIMLGIGLARGQSYLKYLMGDRLPMADEGWMIMTKRLALAFVAMGVTNEVVWR TQSDQFWVTFETFALPAFLFVVFMSQAPLIERFSLSDEEDDQTPGDPT
Sequences:
>Translated_208_residues MAEKQINPWLKNGLELGPPILFFIAYLYLQEKTVTVGGTDYDGFILATALFVPILLASTAILWKLTGVISRIQVFTAILV VFFGALTIWFNDDRFFKMKTSIVYAFFAIMLGIGLARGQSYLKYLMGDRLPMADEGWMIMTKRLALAFVAMGVTNEVVWR TQSDQFWVTFETFALPAFLFVVFMSQAPLIERFSLSDEEDDQTPGDPT >Mature_207_residues AEKQINPWLKNGLELGPPILFFIAYLYLQEKTVTVGGTDYDGFILATALFVPILLASTAILWKLTGVISRIQVFTAILVV FFGALTIWFNDDRFFKMKTSIVYAFFAIMLGIGLARGQSYLKYLMGDRLPMADEGWMIMTKRLALAFVAMGVTNEVVWRT QSDQFWVTFETFALPAFLFVVFMSQAPLIERFSLSDEEDDQTPGDPT
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 23547; Mature: 23416
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKQINPWLKNGLELGPPILFFIAYLYLQEKTVTVGGTDYDGFILATALFVPILLASTA CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHH ILWKLTGVISRIQVFTAILVVFFGALTIWFNDDRFFKMKTSIVYAFFAIMLGIGLARGQS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHH YLKYLMGDRLPMADEGWMIMTKRLALAFVAMGVTNEVVWRTQSDQFWVTFETFALPAFLF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEEHHHHHHHHHHH VVFMSQAPLIERFSLSDEEDDQTPGDPT HHHHCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AEKQINPWLKNGLELGPPILFFIAYLYLQEKTVTVGGTDYDGFILATALFVPILLASTA CCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHH ILWKLTGVISRIQVFTAILVVFFGALTIWFNDDRFFKMKTSIVYAFFAIMLGIGLARGQS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHH YLKYLMGDRLPMADEGWMIMTKRLALAFVAMGVTNEVVWRTQSDQFWVTFETFALPAFLF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEEHHHHHHHHHHH VVFMSQAPLIERFSLSDEEDDQTPGDPT HHHHCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA