| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052785
Identifier: 89052785
GI number: 89052785
Start: 302000
End: 302881
Strand: Reverse
Name: 89052785
Synonym: Jann_0294
Alternate gene names: NA
Gene position: 302881-302000 (Counterclockwise)
Preceding gene: 89052789
Following gene: 89052784
Centisome position: 7.01
GC content: 61.45
Gene sequence:
>882_bases TTGCAACAGTCTCAGCCCCGTCTGACCGATGCCAGAGCGCTTGCCGCTCATCGTGCCCGTGTCAAAGGGGGGACGCACAT TGCAGATGCGCGGTTTCTTCACGATGAGGCCATTGCCGAGCTTCAGGAAAGACTGAAGGACGTTAACAGATCGTTTACAG CACCGGCAATTGTGACTGATTTCCCGACAATTTGGTACGATTTGATTCCAAGTGCGCAATTTTTCCCCGTTCGGGAGGTT CTGGACCTCAAACCCGGTGCCCATGATCTGGTCGTGCACGCGATGGGATTGCATTGGGCCGATGATCCCGTGGGTCAGGT CGTACAATGCGCGCGGGCGCTGGCACCCGACGGTCTGTTCCTGTCCGCAGCCTTTGGCGGCAGCACCCTGACGGAATTGC GCCAGGCGCTCGCGCAGGCGGAAGCGCAGGTGATGGGAGGGCTGTCACCGCGCGTTGCCCCCATGGCGGAGGTGCGCGAT ATGGGGGCGCTGTTGCAACGGGCGGGGCTGGCGTTGCCGGTGGCGGATACGCTGCGCAAGACCGTCACGTACCCCGATGC CATTGCCCTCATGCACGACCTGCGCGCGATGGGGGAAACCAACGCTTTGGCCGAGCGTCACAAGACAATCCCGCCCCGCG CGCTGTTCCCGACGGCCGCCGCAATCTATGCCGAATCCTTCCCGGCACAAGAAAATCGCATCCAAGCGAGCTTTGAGTTC GTATTCCTTACAGGATGGGCCCCGCACGAGAGCCAGCAGACACCCCTGCGGCCCGGCGCAGCGACATCTCGTTTAGCGGA TGCTCTGGGCACCACGGAATTTGACGAGGGGGCCAATCCGGTCCATGACCTCCCCGACGACGAAAGTTTGAAACAGACAT GA
Upstream 100 bases:
>100_bases TGAGGCATTCCGGCGGAAACACCGCATGCAACATGGTTTGCAATCTCATACGTGACCCCTAAGTACCGCGCAGGACGACC ACCCCACCCGGAGCCTTCAT
Downstream 100 bases:
>100_bases ACATGATGCCAGCCGGAGATGCGCCAGCACTGATGGATACAGATGCGCCAGCTTTGACGACGACGGATGCGCCAGCCCTC GCCCACGCGCCCTCGGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTDFPTIWYDLIPSAQFFPVREV LDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLFLSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRD MGALLQRAGLALPVADTLRKTVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT
Sequences:
>Translated_293_residues MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTDFPTIWYDLIPSAQFFPVREV LDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLFLSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRD MGALLQRAGLALPVADTLRKTVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT >Mature_293_residues MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTDFPTIWYDLIPSAQFFPVREV LDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLFLSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRD MGALLQRAGLALPVADTLRKTVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40018642, Length=238, Percent_Identity=34.453781512605, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI86792933, Length=237, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17535003, Length=179, Percent_Identity=32.4022346368715, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI19922210, Length=190, Percent_Identity=38.4210526315789, Blast_Score=144, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 31764; Mature: 31764
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTD CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FPTIWYDLIPSAQFFPVREVLDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLF HHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE LSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRDMGALLQRAGLALPVADTLRK EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH TVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF HCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHEEEEEEE VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTD CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FPTIWYDLIPSAQFFPVREVLDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLF HHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE LSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRDMGALLQRAGLALPVADTLRK EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH TVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF HCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHEEEEEEE VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]