| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052549
Identifier: 89052549
GI number: 89052549
Start: 53043
End: 53549
Strand: Reverse
Name: 89052549
Synonym: Jann_0058
Alternate gene names: NA
Gene position: 53549-53043 (Counterclockwise)
Preceding gene: 89052550
Following gene: 89052548
Centisome position: 1.24
GC content: 58.97
Gene sequence:
>507_bases ATGAAATACGCGCTCCTTGCAAGTCTCCTGGCCGCCATGCCTGCCCATGCGGCGCAATTCCAGTTCTGCTGGGTTGGCGC AAACGGGTATACGATGGAAGGCCGGATCACGTTCCCCGATGCTTTGCTCGACACCGGTCTGATCACTGAGGCGGACGTGA CCGGGTTTCAGATCATTGGACTGATTGACGGCGTCGCTATCGGATCATGGAATATGGCGAGCGCCACGGCACAGACCTCC TGGACCCTGCGCTTTGACACGAACGCGTTGAGGTTCCCCACGGGCGGCCTCAGGTCCGAGAATTCGTATCAGGAATGGAA CGCCAACGGACAGGTTAATGATTGCGGGGCCGAGGGCGGCTTTGGCTGGAACGGCGGCAATTATGCGCAGGACGTCTGCA TTGATAACACCTGGATTGAAGACAGCTCGATCGACCCCGACACACCGCTGTTCGCACAACCGATGGATGTCGCGCTCAGG TGCGAGGCCACGATCCCGATCAGTTGA
Upstream 100 bases:
>100_bases ATGGCGCGCGCAGCCTGCCCTTTCCGGGCGCGCGCTCCGTGGTCAATTGGCCGGCGTGTCATTGGTTGACGTCTCGTGCC GCAAGCCCCACTTTCTGCCC
Downstream 100 bases:
>100_bases GACATGGCACTCGAACGCGCGTGCAGGTATGGCGTGTGTCAGATATGCGTCGAAGAGGATCCGCCAGTGGAACACCCCGT AGATTTAGCTGCCTGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIGLIDGVAIGSWNMASATAQTS WTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGGFGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALR CEATIPIS
Sequences:
>Translated_168_residues MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIGLIDGVAIGSWNMASATAQTS WTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGGFGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALR CEATIPIS >Mature_168_residues MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIGLIDGVAIGSWNMASATAQTS WTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGGFGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALR CEATIPIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18082; Mature: 18082
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIG CCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECEEECCHHHHCCCCEEECCCCCEEEEE LIDGVAIGSWNMASATAQTSWTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGG EECCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHCCCCCCEECCCCCCC FGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALRCEATIPIS CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCC >Mature Secondary Structure MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIG CCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECEEECCHHHHCCCCEEECCCCCEEEEE LIDGVAIGSWNMASATAQTSWTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGG EECCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHCCCCCCEECCCCCCC FGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALRCEATIPIS CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA