| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is fghA [H]
Identifier: 89052543
GI number: 89052543
Start: 47376
End: 48209
Strand: Direct
Name: fghA [H]
Synonym: Jann_0052
Alternate gene names: 89052543
Gene position: 47376-48209 (Clockwise)
Preceding gene: 89052542
Following gene: 89052544
Centisome position: 1.1
GC content: 62.83
Gene sequence:
>834_bases ATGGAAACCATCTCTGAGAACAAAGCCTTCGGCGGCACGCAGGGCGTCTACACCCACGCCTCGGATGCGACGGATTGCGA CATGACCTTCGGCCTGTTCCTGCCCGGTGAGGCCGCAGACGGCCCCGTGCCGGTCCTATGGTATCTGTCAGGTCTGACCT GCACCCATGAGAACGCGATGAGCAAAGCCGGCGCGCAGGGATGGGCCGCCGAGCAAGGCATCGCGCTGATTTTCCCCGAT ACCTCCCCACGCGGGGAAGGCGTGGCCGATGACCCGTCTTACGATCTGGGCCAGGGGGCGGGCTTTTATGTGAACGCCAC GCAAAACCCCTGGGCCCCGCATTTCAGGATGTGGGACTACATCGTGGACGATCTGCCTGCGCTGGTGTTTGAGCATTTCA CGCTGGACCGTGACAGGCAGGCCATCACGGGTCATTCCATGGGCGGGCACGGTGCGCTGACCATCGCGATGCACCACCCG GATCGGTTCACCTCCGTCTCGGCCTTCGCGCCGATCTGCAACCCCTGCGACAGCGACTGGGGGCGCAAGCAGATGACATC CTACCTTGGGATGGATGAAGATACCTGGGCCGCCCACGACGCGACCCTTTTGATGCATGCGGCGGGGTTTGACGGGCCCA TGCTGATCGACACCGGCACCGATGATCAGTTCGGGGATCTTCTGAAGACCGAGGCCTTTGCCCACGCCGCCGCCCTGCGC CGCCAACAGCTGACACTTCGGATGCAGCCGGGATACGACCATTCCTATTTCTTCGTGTCGAGCTTCATGGAAGACCATGT CGCGTTCCACGCCGACGCGCTCTACGCAGTCTGA
Upstream 100 bases:
>100_bases CAAAGGATGAGCAAACATCCCCGGCGACGAGATGTAGACGTTGCACCGCCCACCGCGCCCGCGTTACGTGGGGGGAGGCG ATTTGGGGGAGCATCACGCT
Downstream 100 bases:
>100_bases TGGCGGTCTCAGCGGTCATCTTCGACATCGGCAACGTGCTGATCGAGTGGCAACCCGAACGTCACTACGACCGCGTGATC GGTGAGGCACAGCGGCGAGA
Product: carboxylesterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues METISENKAFGGTQGVYTHASDATDCDMTFGLFLPGEAADGPVPVLWYLSGLTCTHENAMSKAGAQGWAAEQGIALIFPD TSPRGEGVADDPSYDLGQGAGFYVNATQNPWAPHFRMWDYIVDDLPALVFEHFTLDRDRQAITGHSMGGHGALTIAMHHP DRFTSVSAFAPICNPCDSDWGRKQMTSYLGMDEDTWAAHDATLLMHAAGFDGPMLIDTGTDDQFGDLLKTEAFAHAAALR RQQLTLRMQPGYDHSYFFVSSFMEDHVAFHADALYAV
Sequences:
>Translated_277_residues METISENKAFGGTQGVYTHASDATDCDMTFGLFLPGEAADGPVPVLWYLSGLTCTHENAMSKAGAQGWAAEQGIALIFPD TSPRGEGVADDPSYDLGQGAGFYVNATQNPWAPHFRMWDYIVDDLPALVFEHFTLDRDRQAITGHSMGGHGALTIAMHHP DRFTSVSAFAPICNPCDSDWGRKQMTSYLGMDEDTWAAHDATLLMHAAGFDGPMLIDTGTDDQFGDLLKTEAFAHAAALR RQQLTLRMQPGYDHSYFFVSSFMEDHVAFHADALYAV >Mature_277_residues METISENKAFGGTQGVYTHASDATDCDMTFGLFLPGEAADGPVPVLWYLSGLTCTHENAMSKAGAQGWAAEQGIALIFPD TSPRGEGVADDPSYDLGQGAGFYVNATQNPWAPHFRMWDYIVDDLPALVFEHFTLDRDRQAITGHSMGGHGALTIAMHHP DRFTSVSAFAPICNPCDSDWGRKQMTSYLGMDEDTWAAHDATLLMHAAGFDGPMLIDTGTDDQFGDLLKTEAFAHAAALR RQQLTLRMQPGYDHSYFFVSSFMEDHVAFHADALYAV
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=281, Percent_Identity=46.9750889679715, Blast_Score=271, Evalue=4e-73, Organism=Escherichia coli, GI1788477, Length=277, Percent_Identity=55.2346570397112, Blast_Score=296, Evalue=7e-82, Organism=Escherichia coli, GI1786551, Length=275, Percent_Identity=44.7272727272727, Blast_Score=264, Evalue=5e-72, Organism=Caenorhabditis elegans, GI17510185, Length=280, Percent_Identity=46.4285714285714, Blast_Score=256, Evalue=6e-69, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=41.8918918918919, Blast_Score=210, Evalue=2e-55, Organism=Drosophila melanogaster, GI45551932, Length=282, Percent_Identity=45.3900709219858, Blast_Score=248, Evalue=2e-66, Organism=Drosophila melanogaster, GI24648347, Length=282, Percent_Identity=45.3900709219858, Blast_Score=248, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30254; Mature: 30254
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METISENKAFGGTQGVYTHASDATDCDMTFGLFLPGEAADGPVPVLWYLSGLTCTHENAM CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCEEECHHHH SKAGAQGWAAEQGIALIFPDTSPRGEGVADDPSYDLGQGAGFYVNATQNPWAPHFRMWDY HHCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH IVDDLPALVFEHFTLDRDRQAITGHSMGGHGALTIAMHHPDRFTSVSAFAPICNPCDSDW HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCC GRKQMTSYLGMDEDTWAAHDATLLMHAAGFDGPMLIDTGTDDQFGDLLKTEAFAHAAALR HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH RQQLTLRMQPGYDHSYFFVSSFMEDHVAFHADALYAV HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure METISENKAFGGTQGVYTHASDATDCDMTFGLFLPGEAADGPVPVLWYLSGLTCTHENAM CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCEEECHHHH SKAGAQGWAAEQGIALIFPDTSPRGEGVADDPSYDLGQGAGFYVNATQNPWAPHFRMWDY HHCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH IVDDLPALVFEHFTLDRDRQAITGHSMGGHGALTIAMHHPDRFTSVSAFAPICNPCDSDW HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCC GRKQMTSYLGMDEDTWAAHDATLLMHAAGFDGPMLIDTGTDDQFGDLLKTEAFAHAAALR HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH RQQLTLRMQPGYDHSYFFVSSFMEDHVAFHADALYAV HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]