Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201240

Identifier: 87201240

GI number: 87201240

Start: 3447652

End: 3448959

Strand: Reverse

Name: 87201240

Synonym: Saro_3228

Alternate gene names: NA

Gene position: 3448959-3447652 (Counterclockwise)

Preceding gene: 87201243

Following gene: 87201239

Centisome position: 96.84

GC content: 59.63

Gene sequence:

>1308_bases
ATGAACGCATCGATTGCATCGCGGGCGCCCTACAGGCCCGCCGCCCGGCCTCGGCCGGTCTCGGCGTTTCGAGCGCTGCT
GCCCGCCATCATCTTGTTCTACGCCACCATCATCCCGATGGAGGTGCGCTTCGACATTGCGGACCAGACCTTCTATCCGC
CGCGTGTCGCGGGCTTTCTGCTCCTGCCGTGGCTGATAACCAAGTTGGTTGGTGGTGGGTTGAGGTACCGGGCGGTTGAC
GGCGTAATGCTGGCAGGCGTCACCTGGATGCTCATCTCGTTCATGGTGTACTATGATCCGATTACCGGACTTCTCCGCTC
CGCCCCTCTGGCGTTCGACACTGTCATTCCATATCTCGTGGCGCGTGTTTGCATCAAAAACTTGACCGATCTGCGGCGGT
TCTTGATCATAGCCGCGCCGGGAATAGCCATTGCCGGCGGTTCCATGGCGCTGGAAAGCTTTTCTCACGTTCCTTTGGTC
AAGCCTGCGGCGGCATCGATTTTCGGGCGGCTTTCGTCCTATGAGAACGGCGTCGCGGTAGGCAGTGCGAAGTTCATCGA
GGAAACCCGCCTCGGGCTTCTGCGCGCGTCGGGTCCGTTTTCACACCCTATCCTCGGCGGGATCTACTTGTCGCTTTTCC
TCCCGCTCTACATCTACTCCGGGATACGAGGCCTGCCGCGCAAGCTGGGCATCGTGGGGTCCGTCTGTGGCTTCTTCTCG
CTAAGCTCCGGCGCGTTTCTGGCGCTTCTCATCGGGCTGGGCATCCTCGTGACCGATTGGGTCCAGAAGAAGGTGCAATT
CCTGAACTGGCGCCTGATCATCGGCGCAGGCGTTCTGGTCGCCAGCTTGCTGCATCTTCTTTCGCAGCGAGGGCTTATCC
CGGTCCTGATCAGGTATACGCTCGATCCTGCCACCGGGCGCTATCGCCTCTATATCTGGGAATACGGAACCCAATCGGTG
GCTAAGCATCCCTTGTTCGGCATCGGGTTCTCGGATTGGGAGCGACTTGCCTGGATGGGGACCAGTGTCGACAATCACTG
GCTGCTTCTGGCCATGCGGCATGGCCTGGTCGTGTCCGTCGCGTTCCTGTTCGTCCTTTGCTACGGTATATATCACCTCG
CAATATCTGCATCGAAGACGCGCGGGTTCGATCGGAACACCTACATTGGCGTCGCGGCAAGCCTGCTGACTCTGTTGATC
ACCGGGTTCACTGTCGCCTTTTTCGGACAGATGGTGACGATGTGCTACTTCTTCCTTGGAATGGCGATCAGCCTGCCGTT
CGCGTCATCCGGCAGGCGCGCCATCTAG

Upstream 100 bases:

>100_bases
TGTAGGAAAATGGATTCTGCTTGTTGCGATGCGGCATTTCTTCTTGCCGGGTCGGGGTGGGCGGGGCTACCCATGCTGCC
TTGCAGGAATTGGCAATAAC

Downstream 100 bases:

>100_bases
CTGTTATGCTGAAGTGGGTCTGGCATTGACGACGCAAGATATTCAGCCCCGGGACTATATACCGTCACTGGATGGCTGGC
GAGCGGTGTCAATTGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFLLLPWLITKLVGGGLRYRAVD
GVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLVARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLV
KPAAASIFGRLSSYENGVAVGSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS
LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYTLDPATGRYRLYIWEYGTQSV
AKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSVAFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLI
TGFTVAFFGQMVTMCYFFLGMAISLPFASSGRRAI

Sequences:

>Translated_435_residues
MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFLLLPWLITKLVGGGLRYRAVD
GVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLVARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLV
KPAAASIFGRLSSYENGVAVGSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS
LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYTLDPATGRYRLYIWEYGTQSV
AKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSVAFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLI
TGFTVAFFGQMVTMCYFFLGMAISLPFASSGRRAI
>Mature_435_residues
MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFLLLPWLITKLVGGGLRYRAVD
GVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLVARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLV
KPAAASIFGRLSSYENGVAVGSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS
LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYTLDPATGRYRLYIWEYGTQSV
AKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSVAFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLI
TGFTVAFFGQMVTMCYFFLGMAISLPFASSGRRAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47634; Mature: 47634

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHH
LLPWLITKLVGGGLRYRAVDGVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLV
HHHHHHHHHHCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLVKPAAASIFGRLSSYENGVAV
HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEC
GSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
LDPATGRYRLYIWEYGTQSVAKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSV
ECCCCCEEEEEEEECCCHHHHCCCCEECCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH
AFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLITGFTVAFFGQMVTMCYFFLG
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAISLPFASSGRRAI
HHHCCCCCCCCCCCC
>Mature Secondary Structure
MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHH
LLPWLITKLVGGGLRYRAVDGVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLV
HHHHHHHHHHCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLVKPAAASIFGRLSSYENGVAV
HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEC
GSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
LDPATGRYRLYIWEYGTQSVAKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSV
ECCCCCEEEEEEEECCCHHHHCCCCEECCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH
AFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLITGFTVAFFGQMVTMCYFFLG
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAISLPFASSGRRAI
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA