Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200536

Identifier: 87200536

GI number: 87200536

Start: 2724740

End: 2725330

Strand: Reverse

Name: 87200536

Synonym: Saro_2523

Alternate gene names: NA

Gene position: 2725330-2724740 (Counterclockwise)

Preceding gene: 87200537

Following gene: 87200535

Centisome position: 76.52

GC content: 66.84

Gene sequence:

>591_bases
ATGAAGACATTCTCCAGGGCCCTGGTCGGGACTGCCGCCGCCGCTGCGGTCGCAGTGTCTTCGGCCAGCCCGGCAGTCGC
CCGCGACCATCGCGGTGGCATCGACGGAGGCGACATCATTGCTGGCGCTCTCGTGATCGGTGGCATCGCCGCCATTGCGG
CCGCAGCCAGCAAGGATAACGATCGCTATGACCGCTATGGCTACGGCGATGACTGGCGTGGCCGTGACGGTTGGAACGAT
GGGCGTTACCGCGACGGCTATAGTGGCCGGGGCAACCCGCGCGGCGCCATCGAACAGTGTGTCCGCACGGCCGAGCGCAC
CGCTTCGCGCAACAGCTATGGCCGGGCCGACGTCACCGACGTTCGCGATGTGAAGCCGACCCGCTGGGGCTACGAAGTGA
AGGGCCGCATCGCCGTGAACGGCATGGGCCGCGACTGGCGCGACGGCGACCGCAACTACGGCCGTGGCTGGGGCGGCGAC
TATCGCGGCTGGAACAACTCGATGCGCGGCTACGATAGCGGATCGTTCAAGTGCAAGGTCGAGCGCGGCCGGGTGGTCGA
TATCGACTTCAGCGGCATTCGTGGTCTTTGA

Upstream 100 bases:

>100_bases
ACAACTCCTGTCATGCCGGTTCAGCGTCGTCTCACGGCGAATCAGGCATTCCTTCATGCGTGGCGGGAACTGCCCGCCGA
TACGAATGAAGGATCGAACC

Downstream 100 bases:

>100_bases
CCATAACGGCTGGTCGCAAAACGGCGGGCGGTTCAGGCATCGGAAAGCCTGGGCCGCCTAGCCCTTTTTCATTGTGACGG
ACCGTCGGCGGCCCGCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDNDRYDRYGYGDDWRGRDGWND
GRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTDVRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGD
YRGWNNSMRGYDSGSFKCKVERGRVVDIDFSGIRGL

Sequences:

>Translated_196_residues
MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDNDRYDRYGYGDDWRGRDGWND
GRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTDVRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGD
YRGWNNSMRGYDSGSFKCKVERGRVVDIDFSGIRGL
>Mature_196_residues
MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDNDRYDRYGYGDDWRGRDGWND
GRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTDVRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGD
YRGWNNSMRGYDSGSFKCKVERGRVVDIDFSGIRGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21226; Mature: 21226

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDN
CCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DRYDRYGYGDDWRGRDGWNDGRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
VRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGDYRGWNNSMRGYDSGSFKCKV
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
ERGRVVDIDFSGIRGL
ECCEEEEEECCCCCCC
>Mature Secondary Structure
MKTFSRALVGTAAAAAVAVSSASPAVARDHRGGIDGGDIIAGALVIGGIAAIAAAASKDN
CCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DRYDRYGYGDDWRGRDGWNDGRYRDGYSGRGNPRGAIEQCVRTAERTASRNSYGRADVTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
VRDVKPTRWGYEVKGRIAVNGMGRDWRDGDRNYGRGWGGDYRGWNNSMRGYDSGSFKCKV
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
ERGRVVDIDFSGIRGL
ECCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA