| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200272
Identifier: 87200272
GI number: 87200272
Start: 2397437
End: 2398069
Strand: Direct
Name: 87200272
Synonym: Saro_2258
Alternate gene names: NA
Gene position: 2397437-2398069 (Clockwise)
Preceding gene: 87200270
Following gene: 87200274
Centisome position: 67.31
GC content: 66.98
Gene sequence:
>633_bases ATGTTAGCCTCGGCCCAAGGGGTGCGCCTGACGGGGGAAGAAGGCGATATGACCAGCAAATGGCCTACCATGCTCGGCGC GGTCGCGGGGGCTGCCGCACTTGGCGCGGGCCTTCAGGTCGGGGGCACCGGGCTCGAAGGGTGGCACCTGGCCGCGCGAT GGACGGCGCGGATCGGCTTTCCGATCTTCCTGATAACTTATGCCGCCTCGTCCTTCGCAAGGCTTTCGCCAGCGCCGTGG AGCCGCGGCCTCGTGCGCGACCGGCGTTGGTGGGGCCTCGGCTTTGCCGCGAGCCATACGATCCACCTCTTCGCCCTGAT CGTGGCGCTGCGCCTTGATCCCGAGCCGCGTACGCTCGTCTCGCTCATTCCCGGCGGGATCGCCTATGCGTTCATCTTCG CGATGGCCCTTACATCGAACGACGCTGCCATGCGCACGCTGGGGCGCAACTGGAAGCGGCTTCATACCTTAGGCATCCAC GTGATCTGGCTGATCTTCACGCTTGCCTATGCAAAGCGCATTCCGCTGGCCGAATCGCGGGCCATAGCGGTGCCCATGAC CCTGCTCGCACTGGCCGCGCTGGGCTTGCGCGTACTTGCCCGTCGCCCTCGCCGCGCCGCTGGGCTCGCCTGA
Upstream 100 bases:
>100_bases GGTCATTGCATTCACGGCGTGTTCTCCCACTTGCTATTCCTCAATATACTAACATTGGTGTAAATACCTCGTCAACACGG CTGGCGGGAAAGCAGCAGTG
Downstream 100 bases:
>100_bases TCAGTCGAACACCCAGTCCTCGCGGGCAATGCCCAGCAGCGAGAGAATGGACGTCAGGTCGCCCCGGTCGATCCAGCCAT CCGCCGCCGCGCGGGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGFPIFLITYAASSFARLSPAPW SRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLVSLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIH VIWLIFTLAYAKRIPLAESRAIAVPMTLLALAALGLRVLARRPRRAAGLA
Sequences:
>Translated_210_residues MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGFPIFLITYAASSFARLSPAPW SRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLVSLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIH VIWLIFTLAYAKRIPLAESRAIAVPMTLLALAALGLRVLARRPRRAAGLA >Mature_210_residues MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGFPIFLITYAASSFARLSPAPW SRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLVSLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIH VIWLIFTLAYAKRIPLAESRAIAVPMTLLALAALGLRVLARRPRRAAGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22602; Mature: 22602
Theoretical pI: Translated: 12.24; Mature: 12.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGF CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCC PIFLITYAASSFARLSPAPWSRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH SLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIHVIWLIFTLAYAKRIPLAESR HHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AIAVPMTLLALAALGLRVLARRPRRAAGLA CHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MLASAQGVRLTGEEGDMTSKWPTMLGAVAGAAALGAGLQVGGTGLEGWHLAARWTARIGF CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCC PIFLITYAASSFARLSPAPWSRGLVRDRRWWGLGFAASHTIHLFALIVALRLDPEPRTLV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH SLIPGGIAYAFIFAMALTSNDAAMRTLGRNWKRLHTLGIHVIWLIFTLAYAKRIPLAESR HHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AIAVPMTLLALAALGLRVLARRPRRAAGLA CHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA