Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200269

Identifier: 87200269

GI number: 87200269

Start: 2393882

End: 2394280

Strand: Direct

Name: 87200269

Synonym: Saro_2255

Alternate gene names: NA

Gene position: 2393882-2394280 (Clockwise)

Preceding gene: 87200262

Following gene: 87200270

Centisome position: 67.21

GC content: 66.17

Gene sequence:

>399_bases
ATGTCCTATGTAATGGCCTACGTCGCCGCCGCCGTGGTTTTCGGGGCGCTCGATGCGGCCTGGCTTGGATGGGCCGGCCC
GAATCTCTACCGGCCCGCACTCGGCGATCTCCTTGCCCCGGCTTTCCGCCCGGCTCCGGCGCTGGTCTTCTATGCTATCT
ATCTTGCAGGCATGGTCTGGTTCGCGATCAGGCCGGGGCTCACGCAGGGCCTCGGAGCAGCCGCTCTCAACGGCGCGCTG
CTCGGCGCGATGTGCTACATGACCTACGATCTGACCAGCCAGGCAGTGCTCGCGCGCTGGCCGGTCCACCTTACCATCAT
AGACGTTGCCTGGGGCACGTTCGCCACGATGGTCGCCGCCACCGCCGCCACCTGGTTCACACTCAGGTTCGCCGGTTAG

Upstream 100 bases:

>100_bases
ACTGGCCAGTTCAGGTACGGTTCCCATTGGGGCAGCATTGACGGCGCGGGAACGCATGGTCAAGCTTCGATGCGCATCTT
CCCGGGAGGTACGAAGTGCC

Downstream 100 bases:

>100_bases
GACTAGCCTCTTGCGCGCCACATCGCTAAGGCGCGCGCCATGTCTCAGATCACTCCTGATGTCGTCGCCGCCCATGGGCT
GTCCGAGGAAGAATACCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSYVMAYVAAAVVFGALDAAWLGWAGPNLYRPALGDLLAPAFRPAPALVFYAIYLAGMVWFAIRPGLTQGLGAAALNGAL
LGAMCYMTYDLTSQAVLARWPVHLTIIDVAWGTFATMVAATAATWFTLRFAG

Sequences:

>Translated_132_residues
MSYVMAYVAAAVVFGALDAAWLGWAGPNLYRPALGDLLAPAFRPAPALVFYAIYLAGMVWFAIRPGLTQGLGAAALNGAL
LGAMCYMTYDLTSQAVLARWPVHLTIIDVAWGTFATMVAATAATWFTLRFAG
>Mature_131_residues
SYVMAYVAAAVVFGALDAAWLGWAGPNLYRPALGDLLAPAFRPAPALVFYAIYLAGMVWFAIRPGLTQGLGAAALNGALL
GAMCYMTYDLTSQAVLARWPVHLTIIDVAWGTFATMVAATAATWFTLRFAG

Specific function: Unknown

COG id: COG4852

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14010; Mature: 13878

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVMAYVAAAVVFGALDAAWLGWAGPNLYRPALGDLLAPAFRPAPALVFYAIYLAGMVW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FAIRPGLTQGLGAAALNGALLGAMCYMTYDLTSQAVLARWPVHLTIIDVAWGTFATMVAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEHHHHHHHHHHHH
TAATWFTLRFAG
HHHHHHEEEECC
>Mature Secondary Structure 
SYVMAYVAAAVVFGALDAAWLGWAGPNLYRPALGDLLAPAFRPAPALVFYAIYLAGMVW
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FAIRPGLTQGLGAAALNGALLGAMCYMTYDLTSQAVLARWPVHLTIIDVAWGTFATMVAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEHHHHHHHHHHHH
TAATWFTLRFAG
HHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA