Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199522

Identifier: 87199522

GI number: 87199522

Start: 1547734

End: 1549518

Strand: Direct

Name: 87199522

Synonym: Saro_1504

Alternate gene names: NA

Gene position: 1547734-1549518 (Clockwise)

Preceding gene: 87199521

Following gene: 87199523

Centisome position: 43.46

GC content: 65.15

Gene sequence:

>1785_bases
ATGACAGCTTCCCTCGATCTCTGGCCAATCGGCAACTGCCAGGTTTCGGCGCTGGTCGATACCTCGGGCGCATTTGTCTG
GGGCTGCATTCCGCGGGTCGATGGTGATCCGTTCTTCTCGGCCCTGCTGGGCGGTGAGATGCCGCGGGAAGGCCTTTGGG
CAATCGATCTCGAAGACCGGCTGGAAACCACCCAAAGCTATCTGCGCAATACCCCGATCCTCGTCACCCGCCACCGCGAT
GCCAATGGCGGTGAGATCGAGGTGCTGGACTTCTGCCCATATCTCCCGCGCAATGGCCGCACCTATCGCCCCGTGGCCTA
TGCCCGGATCGTGCGCCCCATCGCGGGCAGCCCGCGCATCCGCATGCGCCTGCGGCCTACCTGCGGGTGGGGCAACACCT
GCCGGATGACCATCGGCGGATCGAACCATATCCGCTACCTGTCCGAAGCCATGACGATGCGGCTGACCACGTCCGCACCG
GTCGGCCTCGTTGCCGAGGAACGGGCCTTCCGCCTTGAACAGGCGCACTACTTCTTCCTCGGCCCGGACGAGAGCTTCTC
GGGCAACCTTGCCGAAACGCTCGAACGGATGCTCGAGGCAACCGCTGCCGAGTGGCGCCACTGGGTGCGGGGCCTGGCCA
CGCCGGTCGAATGGCAGGACGTGGTGATCCGGTCGGCCATAACGCTCAAGCTGTGCCAGCACGAGGAAACCGGCGCCATC
GTAGCCGCGCTGACCACCTCGATCCCCGAACATGCCGGATCGCAGCGGAACTGGGACTATCGCTACTGCTGGATCCGCGA
TGCCTACTACACCGTGCAGGCCCTCAATCGCCTCGGCGCGCTGGACGTGCTCGAAGGTTATCTCGCCTACTTGCGCAATG
TCGTCGACAATGCGCGCGGTGGCCATATCCAGCCGCTCTATGGCGTGCTCGGCGAAGCGAAGCTGGACGAAGGCCTTGCC
GAAAGGCTGCCCGGCTATCGCGCGATGGGGCCGGTCCGCATCGGCAACGCAGCCTGGTCGCAGGTTCAGCACGATGCCTA
TGGCCAGATCGTCCTGTCCAACACGCAGGCGTTCCTTGACCAGCGCTTGCTGCGCATGTCCGGCCTCGCCGATTTTGAAG
CGCTGGAAAAGGTCGGCGAAAGGGCATGGGCCCTGTTCGACAAGCCCGATGCCGGCCTGTGGGAACTGCGCACCCGCCAG
TCGGTCCATACATATTCGGCGGCGATGTGCTGGGCGGCCTGTGACCGGCTGGGCAACGCCGCGCACGCGATTGGCCTTGA
TGACCGCGCGGCCTTCTGGGGCGAGCGCGCAGCCGCGATCCGCGAGCGGATAGAGCAGGCCGCGTGGTGTCCCGAGACCG
AGCGGATGTCGGCCACGTTCTCGGGCGACGATCTCGATGCAAGCGTGATCCAGTTGCTCGACCTGCGCTTCCTCGCGCCG
GACGATCCGCGCTTCGTCTCCACGCTGGCCGCCATCGAACAGGGCCTGCGGCGCGGATCGCACATGCTGCGCTATGCCAC
CGAGGACGATTTCGGCCTTCCCGAAACCGCCTTCAACGTCTGCACCTTCTGGCTGATAGAAGCCCTGCACCTGACCGGAC
GCCGTGCCGAAGCCCGCGCGCTCTACGAAGAGATGCTCAGCCGCCGCACCCAGTCGGGCCTCCTTTCGGAGGACATCGAT
CCGGCAACCGGCGAACTCTGGGGAAACTACCCGCAGACCTACTCACTTGTCGGCCTGATCAACTGCGCCGTCCTGCTGAG
CAAACCGTGGAATACCGTACGATGA

Upstream 100 bases:

>100_bases
GCGGCCACGCGATCCTTGTCGGCGAACCCAGGCCCACGCTTGCCACCTTCCGCCTGCGCTCGCCGGAGGAACTTCGCGAA
TGGCTCTGGAGAGCAACGGT

Downstream 100 bases:

>100_bases
GCAGGCTGATAGTCATTTCGAACCGCGTCAGCGCCGGTGGGGGCGCGCAAGGCGGACTTGCCGTCGCGCTTTCGGCGGCC
TTGCGCGAACATGGAGGGAT

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family; Glycosy Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MTASLDLWPIGNCQVSALVDTSGAFVWGCIPRVDGDPFFSALLGGEMPREGLWAIDLEDRLETTQSYLRNTPILVTRHRD
ANGGEIEVLDFCPYLPRNGRTYRPVAYARIVRPIAGSPRIRMRLRPTCGWGNTCRMTIGGSNHIRYLSEAMTMRLTTSAP
VGLVAEERAFRLEQAHYFFLGPDESFSGNLAETLERMLEATAAEWRHWVRGLATPVEWQDVVIRSAITLKLCQHEETGAI
VAALTTSIPEHAGSQRNWDYRYCWIRDAYYTVQALNRLGALDVLEGYLAYLRNVVDNARGGHIQPLYGVLGEAKLDEGLA
ERLPGYRAMGPVRIGNAAWSQVQHDAYGQIVLSNTQAFLDQRLLRMSGLADFEALEKVGERAWALFDKPDAGLWELRTRQ
SVHTYSAAMCWAACDRLGNAAHAIGLDDRAAFWGERAAAIRERIEQAAWCPETERMSATFSGDDLDASVIQLLDLRFLAP
DDPRFVSTLAAIEQGLRRGSHMLRYATEDDFGLPETAFNVCTFWLIEALHLTGRRAEARALYEEMLSRRTQSGLLSEDID
PATGELWGNYPQTYSLVGLINCAVLLSKPWNTVR

Sequences:

>Translated_594_residues
MTASLDLWPIGNCQVSALVDTSGAFVWGCIPRVDGDPFFSALLGGEMPREGLWAIDLEDRLETTQSYLRNTPILVTRHRD
ANGGEIEVLDFCPYLPRNGRTYRPVAYARIVRPIAGSPRIRMRLRPTCGWGNTCRMTIGGSNHIRYLSEAMTMRLTTSAP
VGLVAEERAFRLEQAHYFFLGPDESFSGNLAETLERMLEATAAEWRHWVRGLATPVEWQDVVIRSAITLKLCQHEETGAI
VAALTTSIPEHAGSQRNWDYRYCWIRDAYYTVQALNRLGALDVLEGYLAYLRNVVDNARGGHIQPLYGVLGEAKLDEGLA
ERLPGYRAMGPVRIGNAAWSQVQHDAYGQIVLSNTQAFLDQRLLRMSGLADFEALEKVGERAWALFDKPDAGLWELRTRQ
SVHTYSAAMCWAACDRLGNAAHAIGLDDRAAFWGERAAAIRERIEQAAWCPETERMSATFSGDDLDASVIQLLDLRFLAP
DDPRFVSTLAAIEQGLRRGSHMLRYATEDDFGLPETAFNVCTFWLIEALHLTGRRAEARALYEEMLSRRTQSGLLSEDID
PATGELWGNYPQTYSLVGLINCAVLLSKPWNTVR
>Mature_593_residues
TASLDLWPIGNCQVSALVDTSGAFVWGCIPRVDGDPFFSALLGGEMPREGLWAIDLEDRLETTQSYLRNTPILVTRHRDA
NGGEIEVLDFCPYLPRNGRTYRPVAYARIVRPIAGSPRIRMRLRPTCGWGNTCRMTIGGSNHIRYLSEAMTMRLTTSAPV
GLVAEERAFRLEQAHYFFLGPDESFSGNLAETLERMLEATAAEWRHWVRGLATPVEWQDVVIRSAITLKLCQHEETGAIV
AALTTSIPEHAGSQRNWDYRYCWIRDAYYTVQALNRLGALDVLEGYLAYLRNVVDNARGGHIQPLYGVLGEAKLDEGLAE
RLPGYRAMGPVRIGNAAWSQVQHDAYGQIVLSNTQAFLDQRLLRMSGLADFEALEKVGERAWALFDKPDAGLWELRTRQS
VHTYSAAMCWAACDRLGNAAHAIGLDDRAAFWGERAAAIRERIEQAAWCPETERMSATFSGDDLDASVIQLLDLRFLAPD
DPRFVSTLAAIEQGLRRGSHMLRYATEDDFGLPETAFNVCTFWLIEALHLTGRRAEARALYEEMLSRRTQSGLLSEDIDP
ATGELWGNYPQTYSLVGLINCAVLLSKPWNTVR

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66497; Mature: 66366

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLDLWPIGNCQVSALVDTSGAFVWGCIPRVDGDPFFSALLGGEMPREGLWAIDLEDR
CCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEHHHH
LETTQSYLRNTPILVTRHRDANGGEIEVLDFCPYLPRNGRTYRPVAYARIVRPIAGSPRI
HHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
RMRLRPTCGWGNTCRMTIGGSNHIRYLSEAMTMRLTTSAPVGLVAEERAFRLEQAHYFFL
EEEEECCCCCCCEEEEEECCCCHHHHHHHHHHEEEECCCCCCEEEHHHHHHHCCCEEEEE
GPDESFSGNLAETLERMLEATAAEWRHWVRGLATPVEWQDVVIRSAITLKLCQHEETGAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCE
VAALTTSIPEHAGSQRNWDYRYCWIRDAYYTVQALNRLGALDVLEGYLAYLRNVVDNARG
EEHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
GHIQPLYGVLGEAKLDEGLAERLPGYRAMGPVRIGNAAWSQVQHDAYGQIVLSNTQAFLD
CCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCCEEEEECHHHHHH
QRLLRMSGLADFEALEKVGERAWALFDKPDAGLWELRTRQSVHTYSAAMCWAACDRLGNA
HHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHAIGLDDRAAFWGERAAAIRERIEQAAWCPETERMSATFSGDDLDASVIQLLDLRFLAP
CEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEECCCCCHHHHHHHHHHHHCCC
DDPRFVSTLAAIEQGLRRGSHMLRYATEDDFGLPETAFNVCTFWLIEALHLTGRRAEARA
CCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LYEEMLSRRTQSGLLSEDIDPATGELWGNYPQTYSLVGLINCAVLLSKPWNTVR
HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TASLDLWPIGNCQVSALVDTSGAFVWGCIPRVDGDPFFSALLGGEMPREGLWAIDLEDR
CCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEHHHH
LETTQSYLRNTPILVTRHRDANGGEIEVLDFCPYLPRNGRTYRPVAYARIVRPIAGSPRI
HHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
RMRLRPTCGWGNTCRMTIGGSNHIRYLSEAMTMRLTTSAPVGLVAEERAFRLEQAHYFFL
EEEEECCCCCCCEEEEEECCCCHHHHHHHHHHEEEECCCCCCEEEHHHHHHHCCCEEEEE
GPDESFSGNLAETLERMLEATAAEWRHWVRGLATPVEWQDVVIRSAITLKLCQHEETGAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCE
VAALTTSIPEHAGSQRNWDYRYCWIRDAYYTVQALNRLGALDVLEGYLAYLRNVVDNARG
EEHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
GHIQPLYGVLGEAKLDEGLAERLPGYRAMGPVRIGNAAWSQVQHDAYGQIVLSNTQAFLD
CCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCCEEEEECHHHHHH
QRLLRMSGLADFEALEKVGERAWALFDKPDAGLWELRTRQSVHTYSAAMCWAACDRLGNA
HHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHAIGLDDRAAFWGERAAAIRERIEQAAWCPETERMSATFSGDDLDASVIQLLDLRFLAP
CEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEECCCCCHHHHHHHHHHHHCCC
DDPRFVSTLAAIEQGLRRGSHMLRYATEDDFGLPETAFNVCTFWLIEALHLTGRRAEARA
CCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LYEEMLSRRTQSGLLSEDIDPATGELWGNYPQTYSLVGLINCAVLLSKPWNTVR
HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA