Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is ygcG [H]

Identifier: 87198900

GI number: 87198900

Start: 932898

End: 933737

Strand: Reverse

Name: ygcG [H]

Synonym: Saro_0878

Alternate gene names: 87198900

Gene position: 933737-932898 (Counterclockwise)

Preceding gene: 87198901

Following gene: 87198899

Centisome position: 26.22

GC content: 69.52

Gene sequence:

>840_bases
GTGGTCCGCCCCCTGCGGGCCTTCTGGCAGGCAGTCGCGCTGCTGTTGCTCGCGTTGGCGGGCACGGCAGCCCACGCGGC
CATGCCGGCACGCCCCGCCGGACCGGTACTGGACGAGGCGCAGGTCATTCCCGATGCGGAAGAAGCCGCGATCGCCCAGC
GCCTCGCGGCCTACAACGCCCAGTCCGGGCGAGCCGTGGTGGTCGCAACGGTCGCCTCGCTCGATGGGCAGGACGTCGAG
ACTTACGCCAACACCCTGTTCCGCGCCTGGGGCATTGGCGGCAAGCAGACCGACCAGGGACTGCTGCTCCTGATCGCTCC
CAATGACCGCAAAGTGCGCATCGAAGTCGGCTACGGCCTCGAGGAATACATGCCCGATGTCCTGGCCGGACGCATCCTCT
CGGGCTCGGTCACTCCGCGCTTCAAGGCAGGCGACTACGTCGGCGGCATCAACGCCGGGATCGACCAGATCCTTGCCCAG
TTGAGCCGCACTCCCGCAGACGCCAAAGCCGTTGCCGAGGCTGCGGCGGCACGGCAGCAGAGCGACGGCGCGCAAGGCGG
CGGAGGGTTCTTCGGAAGCGCGCTGTTCTGGATCGTCGTGATCGTGGTCTTCATCGGCATGTTCGGCGGTCGTGGCCGGC
GCGGTTATGTCCAGCGCCGCAGCGGCATTGACCCCGGCATCGTTCTGTGGGGCATCAGTGAAATGGCCCGCGCCGCCTCG
AACAATCGCCATTCCGGCGGCTGGGGCGGAGGCGGTGGTTCCGACTGGGGCGGCGGCGGAGGCTTCGGCGGCTTCGGCGG
CGGCGATTCCGGTGGCGGCGGCGCTTCGGGGGACTGGTGA

Upstream 100 bases:

>100_bases
AAGCCGATGGTGCCGTTCAAGGCCAACGCCGGGTCCGACGTGGCGCCCACGGTCAACTTCGACATGAACGCGCCTGCTCC
CGCCGCCTCGGGCAAGTAAG

Downstream 100 bases:

>100_bases
TGACGCTGGTGATGACAAGGCTTACTCCGATGACCGAGGCCGATCACAAGCTCGTCTCCGATGCCGTGGCAGCAGCCGAA
GCGCACAGCGCGGGCGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVRPLRAFWQAVALLLLALAGTAAHAAMPARPAGPVLDEAQVIPDAEEAAIAQRLAAYNAQSGRAVVVATVASLDGQDVE
TYANTLFRAWGIGGKQTDQGLLLLIAPNDRKVRIEVGYGLEEYMPDVLAGRILSGSVTPRFKAGDYVGGINAGIDQILAQ
LSRTPADAKAVAEAAAARQQSDGAQGGGGFFGSALFWIVVIVVFIGMFGGRGRRGYVQRRSGIDPGIVLWGISEMARAAS
NNRHSGGWGGGGGSDWGGGGGFGGFGGGDSGGGGASGDW

Sequences:

>Translated_279_residues
MVRPLRAFWQAVALLLLALAGTAAHAAMPARPAGPVLDEAQVIPDAEEAAIAQRLAAYNAQSGRAVVVATVASLDGQDVE
TYANTLFRAWGIGGKQTDQGLLLLIAPNDRKVRIEVGYGLEEYMPDVLAGRILSGSVTPRFKAGDYVGGINAGIDQILAQ
LSRTPADAKAVAEAAAARQQSDGAQGGGGFFGSALFWIVVIVVFIGMFGGRGRRGYVQRRSGIDPGIVLWGISEMARAAS
NNRHSGGWGGGGGSDWGGGGGFGGFGGGDSGGGGASGDW
>Mature_279_residues
MVRPLRAFWQAVALLLLALAGTAAHAAMPARPAGPVLDEAQVIPDAEEAAIAQRLAAYNAQSGRAVVVATVASLDGQDVE
TYANTLFRAWGIGGKQTDQGLLLLIAPNDRKVRIEVGYGLEEYMPDVLAGRILSGSVTPRFKAGDYVGGINAGIDQILAQ
LSRTPADAKAVAEAAAARQQSDGAQGGGGFFGSALFWIVVIVVFIGMFGGRGRRGYVQRRSGIDPGIVLWGISEMARAAS
NNRHSGGWGGGGGSDWGGGGGFGGFGGGDSGGGGASGDW

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0603 family [H]

Homologues:

Organism=Escherichia coli, GI87082161, Length=215, Percent_Identity=23.7209302325581, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007621 [H]

Pfam domain/function: PF04536 DUF477 [H]

EC number: NA

Molecular weight: Translated: 28498; Mature: 28498

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPLRAFWQAVALLLLALAGTAAHAAMPARPAGPVLDEAQVIPDAEEAAIAQRLAAYNA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCC
QSGRAVVVATVASLDGQDVETYANTLFRAWGIGGKQTDQGLLLLIAPNDRKVRIEVGYGL
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCH
EEYMPDVLAGRILSGSVTPRFKAGDYVGGINAGIDQILAQLSRTPADAKAVAEAAAARQQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SDGAQGGGGFFGSALFWIVVIVVFIGMFGGRGRRGYVQRRSGIDPGIVLWGISEMARAAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECHHHHHHHHC
NNRHSGGWGGGGGSDWGGGGGFGGFGGGDSGGGGASGDW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRPLRAFWQAVALLLLALAGTAAHAAMPARPAGPVLDEAQVIPDAEEAAIAQRLAAYNA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCC
QSGRAVVVATVASLDGQDVETYANTLFRAWGIGGKQTDQGLLLLIAPNDRKVRIEVGYGL
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCH
EEYMPDVLAGRILSGSVTPRFKAGDYVGGINAGIDQILAQLSRTPADAKAVAEAAAARQQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SDGAQGGGGFFGSALFWIVVIVVFIGMFGGRGRRGYVQRRSGIDPGIVLWGISEMARAAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECHHHHHHHHC
NNRHSGGWGGGGGSDWGGGGGFGGFGGGDSGGGGASGDW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]