| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yitW [H]
Identifier: 86750106
GI number: 86750106
Start: 3403107
End: 3403475
Strand: Reverse
Name: yitW [H]
Synonym: RPB_2989
Alternate gene names: 86750106
Gene position: 3403475-3403107 (Counterclockwise)
Preceding gene: 86750107
Following gene: 86750105
Centisome position: 63.84
GC content: 65.58
Gene sequence:
>369_bases ATGACCGATACGATCGAAGCCAAGGCCAATATGCAGACCGTCTCGGCGCTGCCGCCCGAGGAGACCGAGCGGCTCGGCAC CGAGATCGTCGCGGCGCTGAAGACGGTGTTCGACCCGGAAATTCCGGCCGACATTTACGAACTCGGCCTGATCTACAAGG TCGAGATCAAGGACGACCGCACCGTCGACGTCGACATGACGCTGACGACGCCGAACTGCCCAGCGGCGGCGGAACTGCCG ACCATGGTCGAGAACGCGGTCGCCACCGTGCCCGGCGTCGGCGTGGTCAACGTCGCCATCGTCTGGGAGCCGCCGTGGAC GCCGGAGCGGATGAGCGACGAGGCGCGGCTCGTGCTGAATATGTGGTGA
Upstream 100 bases:
>100_bases AGGTCACGGCGACGTGCCGGGCGTCGTTCGGCATGTATAATACCCGTGAGGAAGTCGACCAACTCGCTAATGCGCTGATC AAGGCGCGGGACCTGTTCGC
Downstream 100 bases:
>100_bases GGTGACGTGCGAGGCCTCGCCGTCATTGCGAGGAGCGCAGCGACGAAGCAATCCATGCCCCGTGCACTGAACTGGATTGC TTCGCTTCGCTCGCAATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDRTVDVDMTLTTPNCPAAAELP TMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLNMW
Sequences:
>Translated_122_residues MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDRTVDVDMTLTTPNCPAAAELP TMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLNMW >Mature_121_residues TDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDRTVDVDMTLTTPNCPAAAELPT MVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLNMW
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 13382; Mature: 13251
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDR CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEECCCC TVDVDMTLTTPNCPAAAELPTMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLN EEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCEEEEEE MW EC >Mature Secondary Structure TDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDR CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEECCCC TVDVDMTLTTPNCPAAAELPTMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLN EEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCEEEEEE MW EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]