| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609469
Identifier: 86609469
GI number: 86609469
Start: 2124863
End: 2125189
Strand: Direct
Name: 86609469
Synonym: CYB_2020
Alternate gene names: NA
Gene position: 2124863-2125189 (Clockwise)
Preceding gene: 86609466
Following gene: 86609470
Centisome position: 69.74
GC content: 57.19
Gene sequence:
>327_bases TTGGACAACAACAGTATCTTACGTCAGCTCTTGCTAATGGGCGTGGGCACAACCACTCTGCTGGCAGAACAGTTGAGAAA GGCTGCCGACGACTTGGTGCAGAAGGGGCAGCTCAACCCAGAAGAGGCATCCAATGTCATCAACAACCTGCTCAACCAGG TGAAGGCCGAGCAGAGTAACTTTGAATCCTACGTTCAGCGGCAGGTGCGCAACGTCCTGCAGGATCTGGGCGTGCCCCGC CAATCGGAAATGGACGAGCTGCGCGGGCGGCTGGATCGGCTGGAGCGGCAGGTGCGCAATTTGGAAAATCAGGTTTACCG CCGGTAG
Upstream 100 bases:
>100_bases AGAAACTGGCCGAGCCGGTTGCGAAGTTGAGGGCAAACTGAGGAAAATGGGTAGTCATGGAGGCCCGTACCGTTCGCGAA GCGTCCTTTGGAGGGCAGCA
Downstream 100 bases:
>100_bases CCGAGCCAAGCCTTCCCCTTTTGCCGGCTTTCCTTTGCCGTTGGGCAGGGTTTTGCCGAACGTTGCGATACCCTGAAGTC CTCTCTGGGAGAATTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSNFESYVQRQVRNVLQDLGVPR QSEMDELRGRLDRLERQVRNLENQVYRR
Sequences:
>Translated_108_residues MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSNFESYVQRQVRNVLQDLGVPR QSEMDELRGRLDRLERQVRNLENQVYRR >Mature_108_residues MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSNFESYVQRQVRNVLQDLGVPR QSEMDELRGRLDRLERQVRNLENQVYRR
Specific function: Unknown
COG id: COG3937
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12504; Mature: 12504
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSN CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH FESYVQRQVRNVLQDLGVPRQSEMDELRGRLDRLERQVRNLENQVYRR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNNSILRQLLLMGVGTTTLLAEQLRKAADDLVQKGQLNPEEASNVINNLLNQVKAEQSN CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH FESYVQRQVRNVLQDLGVPRQSEMDELRGRLDRLERQVRNLENQVYRR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA