| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yiiP [C]
Identifier: 86609387
GI number: 86609387
Start: 2015190
End: 2016095
Strand: Direct
Name: yiiP [C]
Synonym: CYB_1931
Alternate gene names: 86609387
Gene position: 2015190-2016095 (Clockwise)
Preceding gene: 86609384
Following gene: 86609389
Centisome position: 66.14
GC content: 61.37
Gene sequence:
>906_bases GTGAGCTTTCTGGATTCTGCTGCCATAGCCAGCCGCCGTCAGCGCCAAGTGCAGAGGGTGCTGTACGTCACGCTAGGGCT AAATGTCCTGGTGTTTCTGATCAAGTTAATCCTGGGGCTGACGACGGGATCCCTAAGCCTAATTGCCGATGCCCTGCACA GCTCCACCGACAGCGCCAGCAACATTTTGGGCTTGGTGGCCGTGCGCTTTTCTTCGCCAGAGCCCGATGACGACCATCCC TACGGCCATCGCAAGTTTGAAGCCATTGGAGCGCTGGGGATCGCCGCCTTTTTGGGGATGGCCAGCCTGGAGATCCTGCG CACAGCCGTGGAGCGGTTTTGGGAGCCCCAGCCCCACCTGCAGATCGATGAGCTGACCTTGGGGATGATGGTGGGCGTGC TGGGCATTAATGTCTTTGTCACCCTCTACGAGCACCGCTGGGGCAAAGCTCTGTCCAGCTCGCTGCTGTTGGCCGATGCG CGCCATACCCTCAGCGACGTTGGGGTGACGCTGACGGTGTTGCTGGGGTTGGCCGGCATGCATTATTGGGGGATCCCTTG GTTGGATCAAGCCCTGGCTTTGCCGGTGGCGCTGCTGGTGCTCCGAAGCGGCTGGGAAGTGCTGCAGGAGAATCTTCCCT ACCTCACAGATCGGGTGGCGATCCCTGCCGAGGCCCTGCGGGATCTGATCCTGAGCGTGCCAGGCGTGCTCGACTGCCAT GACATCACTTCCCGCGGCATCCCAGGGGAAATGGTCTTTATCGAGATGCACCTGGTGGTGGAGCCACAGGACATTGAGTC CGCCCACCGCCTCACTGAGGAAGTCGAACACCTCCTGCAAGGGCGCTACGGGCCGGCGCGGATCCTCATCCACCTGGAGC CTCGCTCCCATATCGAGCAACCCTAG
Upstream 100 bases:
>100_bases CTAAGCCTTAGCAGCTTGCTTTTAGGGTACCCTCCCTTACCCCTATTGAGGTCGGTGACAGAATAAAGCGGGATATCTGT GGATCCCCGCCCGAGCTGCA
Downstream 100 bases:
>100_bases CAGGAGCTCGCCACCTGCCAACAGATAGCCTAGCCAAACCTCAGGGATCCTGATGTTTCCAAAAGAACACCAAAACGGTA TCAACGCCTCTGCGAGCGTC
Product: cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSASNILGLVAVRFSSPEPDDDHP YGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHLQIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADA RHTLSDVGVTLTVLLGLAGMHYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQP
Sequences:
>Translated_301_residues MSFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSASNILGLVAVRFSSPEPDDDHP YGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHLQIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADA RHTLSDVGVTLTVLLGLAGMHYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQP >Mature_300_residues SFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSASNILGLVAVRFSSPEPDDDHPY GHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHLQIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADAR HTLSDVGVTLTVLLGLAGMHYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCHD ITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQP
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=288, Percent_Identity=29.1666666666667, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786966, Length=298, Percent_Identity=26.8456375838926, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6325032, Length=229, Percent_Identity=24.8908296943231, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323831, Length=222, Percent_Identity=25.6756756756757, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 33168; Mature: 33037
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH NILGLVAVRFSSPEPDDDHPYGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHL HHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADARHTLSDVGVTLTVLLGLAGM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCH DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQ HHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCC P C >Mature Secondary Structure SFLDSAAIASRRQRQVQRVLYVTLGLNVLVFLIKLILGLTTGSLSLIADALHSSTDSAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH NILGLVAVRFSSPEPDDDHPYGHRKFEAIGALGIAAFLGMASLEILRTAVERFWEPQPHL HHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QIDELTLGMMVGVLGINVFVTLYEHRWGKALSSSLLLADARHTLSDVGVTLTVLLGLAGM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYWGIPWLDQALALPVALLVLRSGWEVLQENLPYLTDRVAIPAEALRDLILSVPGVLDCH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCH DITSRGIPGEMVFIEMHLVVEPQDIESAHRLTEEVEHLLQGRYGPARILIHLEPRSHIEQ HHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]