Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608863

Identifier: 86608863

GI number: 86608863

Start: 1466542

End: 1466985

Strand: Reverse

Name: 86608863

Synonym: CYB_1394

Alternate gene names: NA

Gene position: 1466985-1466542 (Counterclockwise)

Preceding gene: 86608865

Following gene: 86608862

Centisome position: 48.15

GC content: 50.45

Gene sequence:

>444_bases
GTGGTCAGGCAGCTACAGCCACCGCCTCGGTTGTCTGTCAAAGAGCTGCAGAAAGCGATTTACAACCACTTTGGCGTTAA
AAACGCAGCCGAGCTGAGAAAGTCAGCCAGCTTCAAACTGGCAACCAGCGGCATGGGCAAGCTGAGCTTATCCAACATAG
ACGATTTGGAGCGCATTTATCGTCAGCACATCGGGATCCTTCCCAACGAAGAGGGGGAAGAGGGGTATGGCTGCATCAAC
GGGATCAACATCTTCAAGTACGACTTGCCATGGCGGGTTTTTGGACTTGACCCCGATCGAGCTACCAATGAGGACATCAA
AGCTGCCTTTTATCGCCTGAGCAAGATCTACCATCCCGATTCTCCAACCGGGGATGACAAAATTTTCCAGCGATTGACTC
TCTTCTACAAAAGCCTTACGGAGAAATTTGAGCAATGGCTATAG

Upstream 100 bases:

>100_bases
GACCAAGCCCGATCCGCAAGGGGCGATTGCTGCAGAAATCCAGCGCCTTTCCGATACCTACGGCATCTCTAAGGAACTCC
TGGAGAATTTTGCGCGGTTT

Downstream 100 bases:

>100_bases
TCTATGTTTCTTCAAACAAGCTCGCCGAATTTTTGGGTATCAGCCTTGAGGAACTCAGGGAGATTGAAGCCTACTTTGAC
AGTATCCCTGATGATGAGTG

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: DNAJ Domain Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIYRQHIGILPNEEGEEGYGCIN
GINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPDSPTGDDKIFQRLTLFYKSLTEKFEQWL

Sequences:

>Translated_147_residues
MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIYRQHIGILPNEEGEEGYGCIN
GINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPDSPTGDDKIFQRLTLFYKSLTEKFEQWL
>Mature_147_residues
MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIYRQHIGILPNEEGEEGYGCIN
GINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPDSPTGDDKIFQRLTLFYKSLTEKFEQWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16983; Mature: 16983

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIY
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHH
RQHIGILPNEEGEEGYGCINGINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPD
HHHCCCCCCCCCCCCCCEECCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
SPTGDDKIFQRLTLFYKSLTEKFEQWL
CCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRQLQPPPRLSVKELQKAIYNHFGVKNAAELRKSASFKLATSGMGKLSLSNIDDLERIY
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHH
RQHIGILPNEEGEEGYGCINGINIFKYDLPWRVFGLDPDRATNEDIKAAFYRLSKIYHPD
HHHCCCCCCCCCCCCCCEECCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
SPTGDDKIFQRLTLFYKSLTEKFEQWL
CCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA