Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608043

Identifier: 86608043

GI number: 86608043

Start: 561907

End: 562269

Strand: Reverse

Name: 86608043

Synonym: CYB_0551

Alternate gene names: NA

Gene position: 562269-561907 (Counterclockwise)

Preceding gene: 86608044

Following gene: 86608041

Centisome position: 18.46

GC content: 61.71

Gene sequence:

>363_bases
ATGGCAGACTCCGATCCCAAGCCAAGATCGCCCCTGTCGCAACGCCGGGATCCCTCTTCAGCAGAGCAGGTGAGGCTGTT
GACGGAGCTGGCCGCTCCCTACCGCAGCTTGCGGCGCTTCATCTACTTGGCGGTGGGGTTCTCGGCTACCATCGGGGCGT
TTGTGTTTTTCTTTCGAGCCCTGGCGGGACGGGACTTGAACACCACCTTGCCCAGCTTGGCCTTGCAGTTGGGGATCCTG
GCCGGCGCCATCGGCCTGAACAGGCTGGAAAACCGCTCTCACCAGAAGGTGATCAGACAGGTCAAACAACGCTTGGGCAT
GCAGCAAGACTCCCAGGAGCCCCAACGGTCGGCGGACAGTTAG

Upstream 100 bases:

>100_bases
GGAAGAGCGAGATATTCTGGCCGCCTGCCGCGCTGCCGAAGCCGTCTTGGCGGGGGTTTCCGGTCGGGAGCCCCTCTTGT
TGCCTGAGGAGGTGTAGCCA

Downstream 100 bases:

>100_bases
CCCGCCCATTCCCCGCAGCCCCTTTCTCAATCCAGATCAAAGTCATCATCATCCGCGTCAGCACTGCGCAGATAGCGGCG
CTGAGTTTGGCGAGCGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRALAGRDLNTTLPSLALQLGIL
AGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS

Sequences:

>Translated_120_residues
MADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRALAGRDLNTTLPSLALQLGIL
AGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS
>Mature_119_residues
ADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRALAGRDLNTTLPSLALQLGILA
GAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13353; Mature: 13222

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRA
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGRDLNTTLPSLALQLGILAGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADSDPKPRSPLSQRRDPSSAEQVRLLTELAAPYRSLRRFIYLAVGFSATIGAFVFFFRA
CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGRDLNTTLPSLALQLGILAGAIGLNRLENRSHQKVIRQVKQRLGMQQDSQEPQRSADS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA