Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607991

Identifier: 86607991

GI number: 86607991

Start: 508358

End: 509446

Strand: Direct

Name: 86607991

Synonym: CYB_0497

Alternate gene names: NA

Gene position: 508358-509446 (Clockwise)

Preceding gene: 86607990

Following gene: 86607992

Centisome position: 16.69

GC content: 51.42

Gene sequence:

>1089_bases
TTGCAGGGAATAGCTTTTGAGAGAGCTTTGATGATTGAAGACTATTGGGTTGGCAGCCTGCACTTCAGCGAGCCTTTTGG
GGACGATACTCTGGCTCGCCTCAACGCACTTCCCCCTGTTCAAGCTCGCAACGGCCAAACTTACAAGATCCGGGCCGAAC
ATGTCACCATTCACGAGGTGAACCTGGATTACCGCACCAAGTATCGCCTGATCCTGGATCGTTTCAGCTACCTTTACCCC
CAAGCCATCGGCCTGTTCATGGGCTTTGCCTTTCGGGGGGTTTACCTCATCAACAACCCGTTTAGCTTTTATTACTACCT
GCGCAACAAAGATGCTGCCTACATGGTGGTCAAAGAGCTGGGGATCTCCATCCCCAAAACTTACATTCTGCCCCCTAAAG
AAGCCCCCGCATTGAAAGCAGAGGACTTTAAGTATCACAAGTTTTTCGATTGGCAGGGGATGGCGGAAGATCTGGGCTGG
CCAATTGTGATTAAGCCGGCGGAGGGGCGAGAGGCCATTGGAGTAGAAATAGCCCACAACATGGAGCAGCTCCTCTATTT
TTACGACCGCTCTGGATCTCAGGTGATGATGATCCAAGAGAAGGTCAAAACCCCTTACCCTTGGCAGATTCGCGCCCTCT
GCATTGGCCGAAAGATCATTCCGATCAAGTATATCTTTCGCAAGTTCGATGCCAGCGAATATCTGTTTGATCCAGAATTT
CTTACCCCGGAAATGGGCCAGAAAGTCATCAATACCTGTCGGATTATCAATCGAGTTTTGGGCTATGAAATGAACTCGGT
GGAGCTATTCATCGACGAGCAGGGAGAGCTGCAGGCCATCGACTTTAACAATCCGGTGCCCGATGGACGGCTCAAGGCTT
TGGGAGAGATCTTCTATAACGATTACCAGCAGGCCCTTTGCGATTTGGTCTTGGACATCGTGCGGGAACAGCGTCCTTTC
GACTTCCTGCCCCCAGATATCAACCGCTTTGCCCACATTGCCCGACGGGCCGATCTCACCCGCGAGCAGAAGTTTCAGAT
GGCTTTGGAATTGGCCAACCGTTACTACGAGCCCAGGGATCCCGATTAA

Upstream 100 bases:

>100_bases
GCTCAGCCGCAACGACATCCCCCATCAACTGGAGGTATGGGAGGGGGATCACGACTGGCCCACTTGGCAAGCGCAAATCC
GCGCCTTCGCGTAGGATCCC

Downstream 100 bases:

>100_bases
AATCAAACCAGAACCCACAAGTGTGGTTTTCCGCTGGGGAAGTTGTGGACGGGCAAAGGAGCAGCAGCGTGGTTTCCGAC
CCCGTTTCAGGGTGGTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEVNLDYRTKYRLILDRFSYLYP
QAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKELGISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGW
PIVIKPAEGREAIGVEIAHNMEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF
LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYNDYQQALCDLVLDIVREQRPF
DFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRDPD

Sequences:

>Translated_362_residues
MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEVNLDYRTKYRLILDRFSYLYP
QAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKELGISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGW
PIVIKPAEGREAIGVEIAHNMEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF
LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYNDYQQALCDLVLDIVREQRPF
DFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRDPD
>Mature_362_residues
MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEVNLDYRTKYRLILDRFSYLYP
QAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKELGISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGW
PIVIKPAEGREAIGVEIAHNMEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF
LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYNDYQQALCDLVLDIVREQRPF
DFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRDPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42474; Mature: 42474

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEV
CCCCCHHHEEEEEEEEECEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEE
NLDYRTKYRLILDRFSYLYPQAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEEECCCCHHHHHHHH
GISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGWPIVIKPAEGREAIGVEIAHN
CCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEEECCCCCCEECHHHHHH
MEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF
HHHHHHHCCCCCCEEEEEEHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHEECCCC
LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYN
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHH
DYQQALCDLVLDIVREQRPFDFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRD
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC
PD
CC
>Mature Secondary Structure
MQGIAFERALMIEDYWVGSLHFSEPFGDDTLARLNALPPVQARNGQTYKIRAEHVTIHEV
CCCCCHHHEEEEEEEEECEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEE
NLDYRTKYRLILDRFSYLYPQAIGLFMGFAFRGVYLINNPFSFYYYLRNKDAAYMVVKEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEEECCCCHHHHHHHH
GISIPKTYILPPKEAPALKAEDFKYHKFFDWQGMAEDLGWPIVIKPAEGREAIGVEIAHN
CCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEEECCCCCCEECHHHHHH
MEQLLYFYDRSGSQVMMIQEKVKTPYPWQIRALCIGRKIIPIKYIFRKFDASEYLFDPEF
HHHHHHHCCCCCCEEEEEEHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHEECCCC
LTPEMGQKVINTCRIINRVLGYEMNSVELFIDEQGELQAIDFNNPVPDGRLKALGEIFYN
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHH
DYQQALCDLVLDIVREQRPFDFLPPDINRFAHIARRADLTREQKFQMALELANRYYEPRD
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC
PD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA