| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is mviN
Identifier: 86606678
GI number: 86606678
Start: 2057850
End: 2059484
Strand: Reverse
Name: mviN
Synonym: CYA_2038
Alternate gene names: 86606678
Gene position: 2059484-2057850 (Counterclockwise)
Preceding gene: 86606679
Following gene: 86606676
Centisome position: 70.22
GC content: 64.46
Gene sequence:
>1635_bases ATGAAAGAGTCTGCCCCGCGAATCCCATCCGCCGCGTCTTCTCCACCCCGTTCCTTGCTCTCGGTAGCAGGGCTGGTGGC AGGGGCCACGCTGCTCAGCAAGGGCATGGGGTTTATCCGTCAGGCCCTAATCGCGGCAGTCTACGGCTCGGGGACAGAGT ACAGCGCCTTTAGCATAGCCTATGTCCTGCCTGGCTTTTTGTTGATCTTGCTGGGCGGGATCAACGGCCCCTTTCACAGC GCCATCGTCAGCGTGCTCAAAAAGCAGCAGCCGGGAAGAGAGGATCCGGCCCGTTGGCTAGAGTCCATTTCTACCTTGGT GGGCTGCCTGCTCTTAGCGGTGACGTTGGGCCTCTGGTGGGGAGCCGACTGGGTGGTGCGCCTGAGCGCACCAGGGGCCA GCCCCGAAGTGCATGCTCTTGCCGCCGAGCAGTTGCGGATCATGGCGCCGCTGGCCTTGCTCTCGGGCTGGATTGGCATT GGCTTTGGGGCGCTGAATGCGGCCGAGCACTACCTCTTGCCCGCCCTTAGCCCGTTGATCTCCAGCTTGTCAGTCATTGG GATCCTGCTCGCGTTGGGATGGACGGGGATCCCGACGTTGCTGGCCTGGGGGGTGCTCATCGGGGCCATCGCCCAGTGGT TGGCGCAGGTGCCGCTGCAGCAGCGGCTGGGGCTGGGGCGGCTGCGGCTGCGCTTTGAGTGGGGATCCCCGCCGGTGCGG GCGGTGGGCCTGCTGCTGTTGCCGGCGGTGATCTCCTCCGGCATGATCCACATCAATGTCTATGTGGATCTCTTTTTTGC CTCCTTCGTGCCCGGGGATCGCACCATCGGCAACTTGGGCTATGCCCAGCTTTTGGTGCAAACCCCCCTGGGGATCCTCT CCAACATGGTGCTGGTGCCCCTGATGCCTCTCTACGCCCAGCTGGCGGGGGATGGATCCCGCTGGCCGGAGCTGCGCCAG CGTATCCGCCAAGGGCTGATGGTGACGGCCATCCTCACCCTGCCCCTGGCGATGGTGCTGGTGGCCCTGGCCGAACCTAT CGTTCAAGTAGCCTACCAGCGCGGTCGCTTTACGCCGGAGGTGACCCAGGAGGTGGCGGCCCTGCTGATGGCTTATGGGC TGGGGATGACCTGTTACCTGCTGCGGGATGTGCTGGTGCGTATCTTCTACGCCCTGGAGGATGGGGCTACGCCCCTGCAC ATCAGCGGCCTGGCCATCGGCCTCAACGCCCTGCTGGACTTCCTGTTTTTGCCAACCTTTGGAGCACCGGGCATTGCCTT GGCCACGGCAGGCGTTAACCTGATGGCTCTGATTGGGCTGGGGATCCGCCTCCACCAGCGCTTGCCGGAGATCCCCTGGC AGGAGATGGGGCAGGCCCTGCTGCCGTTGCTGGGGATCACCGCCTTGGCCGGGGGCCTCAGCCATTGGCTGTGGACGCAA CTGCGCTCCCACGAGATTCTCGGCTCTTCTCTAATCACCGCCGCCCTCTGGGCCGGTCTGGCCGCCGGCATCGGTCTCAG CTTGTTTGCGGCAGGGGCCCTGTATCTGCGGATCCCGGAAGTGAACTGGCTGGCAGCCCAGATCCAGACGCGCCTGAGCA AGATTGCCAGCCAGCGATCTCCATCCAGATCCTAG
Upstream 100 bases:
>100_bases GCGAGGGGGGTAGCGGCTGTGAGCCTGTGGGTGAATCCTGGGAAGATTAGGGCATCCCGACAGTTGCCCATTGCCAAGGC GGCGGTGGGGAGCTAGGGGT
Downstream 100 bases:
>100_bases GCAGGCCCGACTAGCTGATGGCTTCGAGGTAGTCTCGCACTCGGTTGCGCCGCTTCGGCTGCCGCAGCTTTTGCAGGGCT TTGGCCTCGATTTGCCGTAC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIAYVLPGFLLILLGGINGPFHS AIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWWGADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGI GFGALNAAEHYLLPALSPLISSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVPLMPLYAQLAGDGSRWPELRQ RIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPEVTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLH ISGLAIGLNALLDFLFLPTFGAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRSPSRS
Sequences:
>Translated_544_residues MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIAYVLPGFLLILLGGINGPFHS AIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWWGADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGI GFGALNAAEHYLLPALSPLISSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVPLMPLYAQLAGDGSRWPELRQ RIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPEVTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLH ISGLAIGLNALLDFLFLPTFGAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRSPSRS >Mature_544_residues MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIAYVLPGFLLILLGGINGPFHS AIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWWGADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGI GFGALNAAEHYLLPALSPLISSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVPLMPLYAQLAGDGSRWPELRQ RIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPEVTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLH ISGLAIGLNALLDFLFLPTFGAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRSPSRS
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=453, Percent_Identity=27.3730684326711, Blast_Score=133, Evalue=4e-32,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57833; Mature: 57833
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YVLPGFLLILLGGINGPFHSAIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWW HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGIGFGALNAAEHYLLPALSPLI CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCHHH AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVP HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LMPLYAQLAGDGSRWPELRQRIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPE HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLHISGLAIGLNALLDFLFLPTF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCC GAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCC PSRS CCCC >Mature Secondary Structure MKESAPRIPSAASSPPRSLLSVAGLVAGATLLSKGMGFIRQALIAAVYGSGTEYSAFSIA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YVLPGFLLILLGGINGPFHSAIVSVLKKQQPGREDPARWLESISTLVGCLLLAVTLGLWW HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GADWVVRLSAPGASPEVHALAAEQLRIMAPLALLSGWIGIGFGALNAAEHYLLPALSPLI CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLSVIGILLALGWTGIPTLLAWGVLIGAIAQWLAQVPLQQRLGLGRLRLRFEWGSPPVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCHHH AVGLLLLPAVISSGMIHINVYVDLFFASFVPGDRTIGNLGYAQLLVQTPLGILSNMVLVP HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LMPLYAQLAGDGSRWPELRQRIRQGLMVTAILTLPLAMVLVALAEPIVQVAYQRGRFTPE HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VTQEVAALLMAYGLGMTCYLLRDVLVRIFYALEDGATPLHISGLAIGLNALLDFLFLPTF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCC GAPGIALATAGVNLMALIGLGIRLHQRLPEIPWQEMGQALLPLLGITALAGGLSHWLWTQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSHEILGSSLITAALWAGLAAGIGLSLFAAGALYLRIPEVNWLAAQIQTRLSKIASQRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCC PSRS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]