Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606153

Identifier: 86606153

GI number: 86606153

Start: 1494061

End: 1495182

Strand: Reverse

Name: 86606153

Synonym: CYA_1486

Alternate gene names: NA

Gene position: 1495182-1494061 (Counterclockwise)

Preceding gene: 86606154

Following gene: 86606152

Centisome position: 50.98

GC content: 66.13

Gene sequence:

>1122_bases
ATGGGCTCAGTAGAGGGGGAGAAAGCATTGCAGCATCAGCTCAATCGGCTCAAGCAGTCTAGGCGGTCGCTGCCTCCAGC
CGGCACCTGGCTCAGGGCCGCTGGTTTTGCCTTGCTGCTGGGGCTGTTGTCGGCCTGTCAGGGAACCGAGTGGGGAGAGC
GGCTGCAAAGAGCGGTGCGACCGGTGGGCCTGCCTCCCCCTCTCTCCGCCGACCGACCGGAGACGCCCACGCCTCTGCCG
GGATCCCGCTCCCCCTCTGCTCCTGCCACCCCCCCTGCTTCCTTCACGCCCCCGCCCAGCCAGGTCAGCAGCCGTTTCAC
GGATCTGGAGCCCGGATCCCTGGTGGCCCGTGCTGTCTCTGATCTGGATCGGCTGGGTGTCTTTGCCGATATTGTTGGCA
GTGAGTTTCAGCCGCAGCGTAGCGTTCGTCGCGGCGAATTTGCCCGCTGGTTGGTGCTGGCCAACAACGTCATTCACGCC
GACCAGCCCAGCCGCCAAATCCGTTTGGGATCCGCTGGCGAGCGCCCCTTGTTTTTGGATGTGCCGGAGGAGGATCCCAA
CTTTCGCTACATCCAGGCCCTGGGAGCTGCCGGCCTGGTGGTCGGCGATGCCAACCGCGAGTTCCGCCCCAACAGCCTGC
TGTCGCGGGCAGAGCTGATCCGCATGAAGGCACCTCTGGATTTGCCGCCCGGCCAGATCAAGGGATCCCGAGCAGAGCTG
GAGGAGCGTTGGGGCTTTACCGATGCGGCCCAGATCCCCGACGAGGCCGTTGCCCCCCTGGTGGCGGATCGCAGCCTGGA
GAATGCCTCCACGGTGTTGCGCACCTTCGGCCCCATCCGCACGTTTAACCCCTTTGAGCCGGTCAGCCGCGGGGAAGCGG
CGATTGCCCTTTCGGCCTTTGGGGAGCGAACGGCTCAGGAAGCTGCCTTGCCAACCCCAACTCCCGCAGCCGAGCCCCCC
GACCCTGAGCCTTCTCCTCCTGTTGCCGAGCCAGACCAGACCCCTTCCCCTCCTCCCACCCCTGAGGGCGACCCCTCTCC
CAGCGCCACTGGCAACTCTAAACCTCCAGCCGTCACCCCAGGGGCAGGGGAAATTGTGACGCCGCGCGAGCCTCAGCCCT
AA

Upstream 100 bases:

>100_bases
TAAAAGTGGGGGGTGGGCGCAAAGAATTGCCCCTGGCGGATCTGTTGCCGATGCAAAGCCTGCTGAACTTGTTGGATGTG
CTGGAGGAGTTCAGCCGCAA

Downstream 100 bases:

>100_bases
ATTGAGGGCGATCCCAGCGTAGAAGCGGAGAGGGCCGCAGCGCTTAACCCCCTCTCCTGCTTCGCCCCCCTGAGGCTGGA
TTGCAAAAGGACCAACCCCC

Product: S-layer domain-containing protein

Products: NA

Alternate protein names: S-Layer Region-Like Protein; S-Layer Domain Protein; S-Layer Region-Like; S Layer Domain-Containing Protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MGSVEGEKALQHQLNRLKQSRRSLPPAGTWLRAAGFALLLGLLSACQGTEWGERLQRAVRPVGLPPPLSADRPETPTPLP
GSRSPSAPATPPASFTPPPSQVSSRFTDLEPGSLVARAVSDLDRLGVFADIVGSEFQPQRSVRRGEFARWLVLANNVIHA
DQPSRQIRLGSAGERPLFLDVPEEDPNFRYIQALGAAGLVVGDANREFRPNSLLSRAELIRMKAPLDLPPGQIKGSRAEL
EERWGFTDAAQIPDEAVAPLVADRSLENASTVLRTFGPIRTFNPFEPVSRGEAAIALSAFGERTAQEAALPTPTPAAEPP
DPEPSPPVAEPDQTPSPPPTPEGDPSPSATGNSKPPAVTPGAGEIVTPREPQP

Sequences:

>Translated_373_residues
MGSVEGEKALQHQLNRLKQSRRSLPPAGTWLRAAGFALLLGLLSACQGTEWGERLQRAVRPVGLPPPLSADRPETPTPLP
GSRSPSAPATPPASFTPPPSQVSSRFTDLEPGSLVARAVSDLDRLGVFADIVGSEFQPQRSVRRGEFARWLVLANNVIHA
DQPSRQIRLGSAGERPLFLDVPEEDPNFRYIQALGAAGLVVGDANREFRPNSLLSRAELIRMKAPLDLPPGQIKGSRAEL
EERWGFTDAAQIPDEAVAPLVADRSLENASTVLRTFGPIRTFNPFEPVSRGEAAIALSAFGERTAQEAALPTPTPAAEPP
DPEPSPPVAEPDQTPSPPPTPEGDPSPSATGNSKPPAVTPGAGEIVTPREPQP
>Mature_372_residues
GSVEGEKALQHQLNRLKQSRRSLPPAGTWLRAAGFALLLGLLSACQGTEWGERLQRAVRPVGLPPPLSADRPETPTPLPG
SRSPSAPATPPASFTPPPSQVSSRFTDLEPGSLVARAVSDLDRLGVFADIVGSEFQPQRSVRRGEFARWLVLANNVIHAD
QPSRQIRLGSAGERPLFLDVPEEDPNFRYIQALGAAGLVVGDANREFRPNSLLSRAELIRMKAPLDLPPGQIKGSRAELE
ERWGFTDAAQIPDEAVAPLVADRSLENASTVLRTFGPIRTFNPFEPVSRGEAAIALSAFGERTAQEAALPTPTPAAEPPD
PEPSPPVAEPDQTPSPPPTPEGDPSPSATGNSKPPAVTPGAGEIVTPREPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39686; Mature: 39555

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVEGEKALQHQLNRLKQSRRSLPPAGTWLRAAGFALLLGLLSACQGTEWGERLQRAVR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
PVGLPPPLSADRPETPTPLPGSRSPSAPATPPASFTPPPSQVSSRFTDLEPGSLVARAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
DLDRLGVFADIVGSEFQPQRSVRRGEFARWLVLANNVIHADQPSRQIRLGSAGERPLFLD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCEEEE
VPEEDPNFRYIQALGAAGLVVGDANREFRPNSLLSRAELIRMKAPLDLPPGQIKGSRAEL
CCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
EERWGFTDAAQIPDEAVAPLVADRSLENASTVLRTFGPIRTFNPFEPVSRGEAAIALSAF
HHHCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHH
GERTAQEAALPTPTPAAEPPDPEPSPPVAEPDQTPSPPPTPEGDPSPSATGNSKPPAVTP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAGEIVTPREPQP
CCCCCCCCCCCCC
>Mature Secondary Structure 
GSVEGEKALQHQLNRLKQSRRSLPPAGTWLRAAGFALLLGLLSACQGTEWGERLQRAVR
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
PVGLPPPLSADRPETPTPLPGSRSPSAPATPPASFTPPPSQVSSRFTDLEPGSLVARAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
DLDRLGVFADIVGSEFQPQRSVRRGEFARWLVLANNVIHADQPSRQIRLGSAGERPLFLD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCEEEE
VPEEDPNFRYIQALGAAGLVVGDANREFRPNSLLSRAELIRMKAPLDLPPGQIKGSRAEL
CCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
EERWGFTDAAQIPDEAVAPLVADRSLENASTVLRTFGPIRTFNPFEPVSRGEAAIALSAF
HHHCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHH
GERTAQEAALPTPTPAAEPPDPEPSPPVAEPDQTPSPPPTPEGDPSPSATGNSKPPAVTP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAGEIVTPREPQP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA