| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606154
Identifier: 86606154
GI number: 86606154
Start: 1495170
End: 1495484
Strand: Reverse
Name: 86606154
Synonym: CYA_1487
Alternate gene names: NA
Gene position: 1495484-1495170 (Counterclockwise)
Preceding gene: 86606155
Following gene: 86606153
Centisome position: 50.99
GC content: 59.68
Gene sequence:
>315_bases ATGGCCCAAGTGCCCAGCAACCCAGAGATCGAGCAGTTGGCCGCTGCCATTGGCGAGGAAGTTTACATCGATGTAGCCCG CTGGCACCTCTACCTGCGGGATGCCCATCTGCACACCCTCTTGGCAGAACAACTGGCCCCCCAGGTGAGGGCAGGCAAGG TGGATGAGGACGCGGTCACGGAGATCTTGCAACGGATCCCGGTAAAAGTGGGGGGTGGGCGCAAAGAATTGCCCCTGGCG GATCTGTTGCCGATGCAAAGCCTGCTGAACTTGTTGGATGTGCTGGAGGAGTTCAGCCGCAAATGGGCTCAGTAG
Upstream 100 bases:
>100_bases GAACTTCGCCCTGCCTCTACCGGCCCGCTCTGCCGCCAGCTCTCCCTGAGGTGGGCCCAAGTTATGATCGGCAGAGGGCA ACCACTGACGGAGCTGAGCG
Downstream 100 bases:
>100_bases AGGGGGAGAAAGCATTGCAGCATCAGCTCAATCGGCTCAAGCAGTCTAGGCGGTCGCTGCCTCCAGCCGGCACCTGGCTC AGGGCCGCTGGTTTTGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAQVPSNPEIEQLAAAIGEEVYIDVARWHLYLRDAHLHTLLAEQLAPQVRAGKVDEDAVTEILQRIPVKVGGGRKELPLA DLLPMQSLLNLLDVLEEFSRKWAQ
Sequences:
>Translated_104_residues MAQVPSNPEIEQLAAAIGEEVYIDVARWHLYLRDAHLHTLLAEQLAPQVRAGKVDEDAVTEILQRIPVKVGGGRKELPLA DLLPMQSLLNLLDVLEEFSRKWAQ >Mature_103_residues AQVPSNPEIEQLAAAIGEEVYIDVARWHLYLRDAHLHTLLAEQLAPQVRAGKVDEDAVTEILQRIPVKVGGGRKELPLAD LLPMQSLLNLLDVLEEFSRKWAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021518 [H]
Pfam domain/function: PF11378 DUF3181 [H]
EC number: NA
Molecular weight: Translated: 11661; Mature: 11529
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVPSNPEIEQLAAAIGEEVYIDVARWHLYLRDAHLHTLLAEQLAPQVRAGKVDEDAVT CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH EILQRIPVKVGGGRKELPLADLLPMQSLLNLLDVLEEFSRKWAQ HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQVPSNPEIEQLAAAIGEEVYIDVARWHLYLRDAHLHTLLAEQLAPQVRAGKVDEDAVT CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH EILQRIPVKVGGGRKELPLADLLPMQSLLNLLDVLEEFSRKWAQ HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]