Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605169

Identifier: 86605169

GI number: 86605169

Start: 469759

End: 470304

Strand: Reverse

Name: 86605169

Synonym: CYA_0450

Alternate gene names: NA

Gene position: 470304-469759 (Counterclockwise)

Preceding gene: 86605170

Following gene: 86605165

Centisome position: 16.04

GC content: 61.72

Gene sequence:

>546_bases
ATGTCGCCTCCTTTTCTTAAGGGATCCCTGTTTTGGCTGGCCCTGGTGCTGCAGGTGGGCCTGGTTGGGCTGGTGCCAGC
TCGGAAGGCGCTTACCCTTGCCACTGGCTCCCCGATCTACTTGCAGATTGCTCCTCTGGATCCCTATGACCCCTTGCGGG
GCCGCTACGTAGCTTTGAGCTACACCGTTGCCCAGCTTTCCACCCTAGAGAAACTGCCCGGCTGGTCCCCTGAGCTCGCT
AAGCCAGGGATCCTCTACCTGCGCTTGGCCCCTCCTGCCGGGGATCCTGCTCGACCCTGGCAGGCCATTGCCATCAGTCG
CGACCGGCCCAGGGAGCTGCGGCCTGGGGAGGTTGTCCTGCAAGGGTGGTTTGATGGGCGGCAGCTTAGGTTTGGGATCG
AAGAGTTTTTCATTCCAGAAGCGCTGGGCGATGATCTGGAACCAGAGATCCGCCGCAATCCAGAAACCCTGCGAGCAGAG
GTGAAGGTGGATCCCTGGGGCCAGGCAGCGCTGGTGGGCCTTTGGGCGGGAAAACGACGGTACTAA

Upstream 100 bases:

>100_bases
GGGCTTATGAGTCCCCTGCTCTACCGCTGAGCTACTGAGCCGGGAAGATGCTTAACTAGGATAGCATCTTTGTGCAGGAA
GTTGCTCTCGTCGGCTGGCA

Downstream 100 bases:

>100_bases
AGGCCGGCCTTGTTCTGCAGGGGGGGAGGATCCCTTCTAGCCCTCTTTCTTTTTGCGGGAGCGAGTTGCGCTTGTTTTCT
TGGCCCTGGCAGATGCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSPPFLKGSLFWLALVLQVGLVGLVPARKALTLATGSPIYLQIAPLDPYDPLRGRYVALSYTVAQLSTLEKLPGWSPELA
KPGILYLRLAPPAGDPARPWQAIAISRDRPRELRPGEVVLQGWFDGRQLRFGIEEFFIPEALGDDLEPEIRRNPETLRAE
VKVDPWGQAALVGLWAGKRRY

Sequences:

>Translated_181_residues
MSPPFLKGSLFWLALVLQVGLVGLVPARKALTLATGSPIYLQIAPLDPYDPLRGRYVALSYTVAQLSTLEKLPGWSPELA
KPGILYLRLAPPAGDPARPWQAIAISRDRPRELRPGEVVLQGWFDGRQLRFGIEEFFIPEALGDDLEPEIRRNPETLRAE
VKVDPWGQAALVGLWAGKRRY
>Mature_180_residues
SPPFLKGSLFWLALVLQVGLVGLVPARKALTLATGSPIYLQIAPLDPYDPLRGRYVALSYTVAQLSTLEKLPGWSPELAK
PGILYLRLAPPAGDPARPWQAIAISRDRPRELRPGEVVLQGWFDGRQLRFGIEEFFIPEALGDDLEPEIRRNPETLRAEV
KVDPWGQAALVGLWAGKRRY

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20163; Mature: 20032

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPFLKGSLFWLALVLQVGLVGLVPARKALTLATGSPIYLQIAPLDPYDPLRGRYVALS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEE
YTVAQLSTLEKLPGWSPELAKPGILYLRLAPPAGDPARPWQAIAISRDRPRELRPGEVVL
EHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
QGWFDGRQLRFGIEEFFIPEALGDDLEPEIRRNPETLRAEVKVDPWGQAALVGLWAGKRR
EECCCCCEEEECHHHHHCCHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEECCCCC
Y
C
>Mature Secondary Structure 
SPPFLKGSLFWLALVLQVGLVGLVPARKALTLATGSPIYLQIAPLDPYDPLRGRYVALS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEE
YTVAQLSTLEKLPGWSPELAKPGILYLRLAPPAGDPARPWQAIAISRDRPRELRPGEVVL
EHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
QGWFDGRQLRFGIEEFFIPEALGDDLEPEIRRNPETLRAEVKVDPWGQAALVGLWAGKRR
EECCCCCEEEECHHHHHCCHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEECCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA