Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605170

Identifier: 86605170

GI number: 86605170

Start: 470548

End: 470958

Strand: Reverse

Name: 86605170

Synonym: CYA_0452

Alternate gene names: NA

Gene position: 470958-470548 (Counterclockwise)

Preceding gene: 86605172

Following gene: 86605169

Centisome position: 16.06

GC content: 56.2

Gene sequence:

>411_bases
TTGGCTAGGCATGTAGAATTGTTCCAACTGCTCAAAGCGAAACCCTGCCTCTCGGAGCGAGCGGGCCATCTGGCAGAGGA
AATCGAGGCTTTGGGCAGGCAAGAGCGCCGCGAATTGGTCAATCGCTTGGGGATCCTGCCGGGACACCTCCTCAAGGGGC
AGTTCCAGCTCCAGCTTCGCGGCAAAAGTTGGCGGGCAACTATTAGCGAACAACGTCGCCAAATCCAGCAATTGCTCAAA
GAGAGTCCTAGCCTAAAGCCTGAGCTTTTGGCAGCTCTGCCAGAGGCTTACCAAGACGGGATCCTGTTGGTGGTGAAAGA
AACGCCGCTCTCGGAAGAGGATCTGCCCGCCGAGTGTCCCTACACGCTTGAGCAGGTAATGGATCTCGGCTTTTATCCGG
GATCGGAATAG

Upstream 100 bases:

>100_bases
GAAAGGCAAGGTCGGGCTTTAGAAGCGGCTAACCTGCCTGGGATCCCCCCTCCGGCTCAGGGGAGGCTATACCCCAGTAG
GTGTAGCCGACCCACTTTGG

Downstream 100 bases:

>100_bases
CTCAAGGGGCTTTGCTCGCCCTTGGAAGTGCCGCCTCTTGCAACCTGAGAGCAAAAGCCGGAGCTCCAGCTTAACTGTCC
TCCACAAGCTGTAACCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MARHVELFQLLKAKPCLSERAGHLAEEIEALGRQERRELVNRLGILPGHLLKGQFQLQLRGKSWRATISEQRRQIQQLLK
ESPSLKPELLAALPEAYQDGILLVVKETPLSEEDLPAECPYTLEQVMDLGFYPGSE

Sequences:

>Translated_136_residues
MARHVELFQLLKAKPCLSERAGHLAEEIEALGRQERRELVNRLGILPGHLLKGQFQLQLRGKSWRATISEQRRQIQQLLK
ESPSLKPELLAALPEAYQDGILLVVKETPLSEEDLPAECPYTLEQVMDLGFYPGSE
>Mature_135_residues
ARHVELFQLLKAKPCLSERAGHLAEEIEALGRQERRELVNRLGILPGHLLKGQFQLQLRGKSWRATISEQRRQIQQLLKE
SPSLKPELLAALPEAYQDGILLVVKETPLSEEDLPAECPYTLEQVMDLGFYPGSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15440; Mature: 15309

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHVELFQLLKAKPCLSERAGHLAEEIEALGRQERRELVNRLGILPGHLLKGQFQLQLR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEC
GKSWRATISEQRRQIQQLLKESPSLKPELLAALPEAYQDGILLVVKETPLSEEDLPAECP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
YTLEQVMDLGFYPGSE
HHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARHVELFQLLKAKPCLSERAGHLAEEIEALGRQERRELVNRLGILPGHLLKGQFQLQLR
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEC
GKSWRATISEQRRQIQQLLKESPSLKPELLAALPEAYQDGILLVVKETPLSEEDLPAECP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
YTLEQVMDLGFYPGSE
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA