| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605165
Identifier: 86605165
GI number: 86605165
Start: 465017
End: 465163
Strand: Reverse
Name: 86605165
Synonym: CYA_0446
Alternate gene names: NA
Gene position: 465163-465017 (Counterclockwise)
Preceding gene: 86605169
Following gene: 86605164
Centisome position: 15.86
GC content: 51.02
Gene sequence:
>147_bases TTGTCCTTTACCTGGGAGGGATCGGTGCCCCTTTTTGGAAAGCTGTGGTACATTCGAGGGAGGCCAGAACTGAGCCTTTC CGAGAAGCAGGCTAGAGGCTTTTTGGAGCAAAGCAAAGGGCTGTACTGCAATGGCTTAAGTTTGTAG
Upstream 100 bases:
>100_bases TCCTCACCCTTACCTACAATATCTAGTGTCTCAAACCCTTTAATCACCTATTTTCCCACAATATACAGATGAAAATCTGC TGGCTATTGACCAGTTTCCC
Downstream 100 bases:
>100_bases GGCTGTTGACTTTTTCTCGTCTTGATTGCCTGAGGTTCTCTGGTTTTGTTTGCCCGAGTCTTAGACTTGTGGGGGGTTGC TATTTTCTAGAGGATTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MSFTWEGSVPLFGKLWYIRGRPELSLSEKQARGFLEQSKGLYCNGLSL
Sequences:
>Translated_48_residues MSFTWEGSVPLFGKLWYIRGRPELSLSEKQARGFLEQSKGLYCNGLSL >Mature_47_residues SFTWEGSVPLFGKLWYIRGRPELSLSEKQARGFLEQSKGLYCNGLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5481; Mature: 5350
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTWEGSVPLFGKLWYIRGRPELSLSEKQARGFLEQSKGLYCNGLSL CCEECCCCCCCEEEEEEEECCCCCCCCCHHHCCCHHHCCCEEEECCCC >Mature Secondary Structure SFTWEGSVPLFGKLWYIRGRPELSLSEKQARGFLEQSKGLYCNGLSL CEECCCCCCCEEEEEEEECCCCCCCCCHHHCCCHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA