Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605160

Identifier: 86605160

GI number: 86605160

Start: 461090

End: 461983

Strand: Reverse

Name: 86605160

Synonym: CYA_0441

Alternate gene names: NA

Gene position: 461983-461090 (Counterclockwise)

Preceding gene: 86605161

Following gene: 86605159

Centisome position: 15.75

GC content: 63.87

Gene sequence:

>894_bases
ATGGGCAGGGATCCCTGGCGGGCTTATGCCTACCTGGCGGCAGCTATCTTGGGCTGGGCCACGGCGGCCAGCGCCTTTAA
GTTTGGCCTGCAACACCTTGCGCCAACGCTTTTGCTAATTTTTTCCGCGTGCAGCTCCTGCCTGATCTTGGGGATGGTTC
TGGTGGCTACAGGGCGGGCGCATCTTGTCCGCCAGCAGAAGCGATCCCAGATTGCCTTGTCGGCGCTGCAGGGGCTACTT
AACCCGCTTGGCTACTACGGGGTGCTGTTCCAGGCCTATGATCGCCTCTCGGCCCAGGCGGCGCTGGCTTTGAATTACAC
CTGGCCGCTGCTGCTGGCTCTCTTGGCGGCGCCGCTGTTGGGGGAGCGCCTGCGCGGGCGGCTGCTGCTGGCTTTGGGCA
TGAGCCTAGTGGGGGCGGTGCTGGTGGCCACGGGGGGATCCTGGGACACCTGGCAGGTGGAGGATCCCTGGGGGGTGGGG
CTGGCGGTGGGCAGCGCTGCCATTTGGGCCCTCTACTGGCTGCTCAATGTGCGGGATGGACGGGACGCGGTGCTGAAGCT
GTTCATGGGGTTTGTCTTCGGCAGCTTCTACTGCCTGCTGCTCTTGCCGTTTCAGGAGCTGAGGTGGACAATGGCGGGGC
TGGCCTGGGCAGCCTACATCGGCTTGGCGGAGATGGGGTTGACTTTTGTGTTTTGGCTGCGGGCCCTGGAGCTGGCCCAC
GAGCGCGGATCCCTGGCCAATTGGGTCTATGTAACGCCATTCTTGTCGCTGGGGCTGATTGGGGTGCTGTTGCGGGAGCC
GATCGCGCCGGGATCGGTGCTGGGCCTGGGACTTATCTTGGCCGGCAACCTCTGGGGATCCCGGCGGGAAAAACCTCAGC
CTGTTCTTTCTTAA

Upstream 100 bases:

>100_bases
GGCTGGGCTATCTGCTCTACGTTTGGGTGGTGGCGCCGCGGCTGGGCCTTTCCACCGGAGCTAGGCCAAAGGCGGACGAC
AGGGATCTGGACCGCTTTTG

Downstream 100 bases:

>100_bases
GGCTATGGCGGTGAATCCCATTCCTCTCTATGTAGCGGCAACGGCCCACGGGTTTGGGCACGTCACCCGGCTGGCGGCGG
TGGTGAACACTTTGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Domain-Containing Protein; Transporter Drug/Metabolite Exporter Family; DMT Family Permease; Drug/Metabolite Exporter Family Protein; Drug/Metabolite Transporter Permease; Permease DMT Superfamily; DMT Superfamily Permease; Permease Outative; Drug/Metabolite Transporter Superfamily Permease

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MGRDPWRAYAYLAAAILGWATAASAFKFGLQHLAPTLLLIFSACSSCLILGMVLVATGRAHLVRQQKRSQIALSALQGLL
NPLGYYGVLFQAYDRLSAQAALALNYTWPLLLALLAAPLLGERLRGRLLLALGMSLVGAVLVATGGSWDTWQVEDPWGVG
LAVGSAAIWALYWLLNVRDGRDAVLKLFMGFVFGSFYCLLLLPFQELRWTMAGLAWAAYIGLAEMGLTFVFWLRALELAH
ERGSLANWVYVTPFLSLGLIGVLLREPIAPGSVLGLGLILAGNLWGSRREKPQPVLS

Sequences:

>Translated_297_residues
MGRDPWRAYAYLAAAILGWATAASAFKFGLQHLAPTLLLIFSACSSCLILGMVLVATGRAHLVRQQKRSQIALSALQGLL
NPLGYYGVLFQAYDRLSAQAALALNYTWPLLLALLAAPLLGERLRGRLLLALGMSLVGAVLVATGGSWDTWQVEDPWGVG
LAVGSAAIWALYWLLNVRDGRDAVLKLFMGFVFGSFYCLLLLPFQELRWTMAGLAWAAYIGLAEMGLTFVFWLRALELAH
ERGSLANWVYVTPFLSLGLIGVLLREPIAPGSVLGLGLILAGNLWGSRREKPQPVLS
>Mature_296_residues
GRDPWRAYAYLAAAILGWATAASAFKFGLQHLAPTLLLIFSACSSCLILGMVLVATGRAHLVRQQKRSQIALSALQGLLN
PLGYYGVLFQAYDRLSAQAALALNYTWPLLLALLAAPLLGERLRGRLLLALGMSLVGAVLVATGGSWDTWQVEDPWGVGL
AVGSAAIWALYWLLNVRDGRDAVLKLFMGFVFGSFYCLLLLPFQELRWTMAGLAWAAYIGLAEMGLTFVFWLRALELAHE
RGSLANWVYVTPFLSLGLIGVLLREPIAPGSVLGLGLILAGNLWGSRREKPQPVLS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32271; Mature: 32139

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRDPWRAYAYLAAAILGWATAASAFKFGLQHLAPTLLLIFSACSSCLILGMVLVATGRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
HLVRQQKRSQIALSALQGLLNPLGYYGVLFQAYDRLSAQAALALNYTWPLLLALLAAPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHH
GERLRGRLLLALGMSLVGAVLVATGGSWDTWQVEDPWGVGLAVGSAAIWALYWLLNVRDG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
RDAVLKLFMGFVFGSFYCLLLLPFQELRWTMAGLAWAAYIGLAEMGLTFVFWLRALELAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERGSLANWVYVTPFLSLGLIGVLLREPIAPGSVLGLGLILAGNLWGSRREKPQPVLS
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRDPWRAYAYLAAAILGWATAASAFKFGLQHLAPTLLLIFSACSSCLILGMVLVATGRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
HLVRQQKRSQIALSALQGLLNPLGYYGVLFQAYDRLSAQAALALNYTWPLLLALLAAPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHH
GERLRGRLLLALGMSLVGAVLVATGGSWDTWQVEDPWGVGLAVGSAAIWALYWLLNVRDG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
RDAVLKLFMGFVFGSFYCLLLLPFQELRWTMAGLAWAAYIGLAEMGLTFVFWLRALELAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERGSLANWVYVTPFLSLGLIGVLLREPIAPGSVLGLGLILAGNLWGSRREKPQPVLS
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA