Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605159

Identifier: 86605159

GI number: 86605159

Start: 460003

End: 461085

Strand: Reverse

Name: 86605159

Synonym: CYA_0440

Alternate gene names: NA

Gene position: 461085-460003 (Counterclockwise)

Preceding gene: 86605160

Following gene: 86605158

Centisome position: 15.72

GC content: 66.2

Gene sequence:

>1083_bases
ATGGCGGTGAATCCCATTCCTCTCTATGTAGCGGCAACGGCCCACGGGTTTGGGCACGTCACCCGGCTGGCGGCGGTGGT
GAACACTTTGCGGCGGCAGGATGCGCAGATCCTGCCCATTTGGGTGACGCCGGCCCCCGCCTGGCTGCTGCAGCGCTACG
GGGAAGGGGAGTTTGTGCACCGGCCGCGGGGTTTGGATGTGGGGGTGGTGCAGCCGGATGGCTTGCAGGCGGATCTGCCG
GCCACGCTGGCTGCTCTCAAGGCGTTTCAAGCGGGGGCTGCCGACCTCATCCGGGAGGAGGCCGAGTTCATTCGCAGCCA
GGGGGTGCCGTTGATCCTGGCGGATGTGCCCCCCATCGCCACCGCCATTGCCGAGGCCGCCGGGATCCCCTGCTGGATGG
CCAGCAACTTCGGCTGGGATTTTATCTACCAAGACTACGGCCCCCAGTTTCAGCCCTTGGTGGCCTGGATCCGCGAGCTG
TACGGGCGCTGCCAGCGGCTGTTTCGCCTGCCCTTTGCCGAGCCTATGGCCGCCTTCCCTCACCAAGAGGCAGTGGGGCT
GACGGGGTCGGATCCGCGCTACTCAGGAGAGGAGGTGGCCCGGCGCCTGGGGCTGGAGCGGGAGCGGCCCACGGTTTTGT
TAACCTTTGGCGGGCTGGGGTTGCAGGGCTTGCCTTACGAGCGGCTGACGGATTTTCCCGACTGGCAGTTTCTCACCTTC
GACCCAAAGGCTCCTGCTCTGCCCAACTTGCAGATTCTAGACGGCCAGGTGTGGCGGCCGGTGGATGTCATGCCCCTCTG
CCGTTGGGTGGTGTCCAAGCCGGGCTATGGCACCTTGGCAGAGGCGCTGCGCTGTGGCACGCCCATGGCCTGTGTCAACC
GGTCGGGGTTTGCCGAGTCGCCCCTGTTGGTGGAGGGATTGCGGCGCTACGGATGGCACCGCATCCTCTCGCCGGAAGAG
TTCTTTGCGGGATCCTGGGACTTCCTGCGGGATCCCCCCTACCCACCCCAGGCGTCGGAGAAGTTGGATCGGGGGGGCAA
TGAGGCCATTGCCGCTGCCATCGCGGCCTTCCTGAGGCAGTAG

Upstream 100 bases:

>100_bases
CCGATCGCGCCGGGATCGGTGCTGGGCCTGGGACTTATCTTGGCCGGCAACCTCTGGGGATCCCGGCGGGAAAAACCTCA
GCCTGTTCTTTCTTAAGGCT

Downstream 100 bases:

>100_bases
CATAGGGAGCAGCTTCTTGGAGCGGATCCCATGGCCGGCAGCACGACCGAGTCTTTGCGGCAAGTCTACGAGGAACTGCC
CTATCCCAACGTGCCCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAVNPIPLYVAATAHGFGHVTRLAAVVNTLRRQDAQILPIWVTPAPAWLLQRYGEGEFVHRPRGLDVGVVQPDGLQADLP
ATLAALKAFQAGAADLIREEAEFIRSQGVPLILADVPPIATAIAEAAGIPCWMASNFGWDFIYQDYGPQFQPLVAWIREL
YGRCQRLFRLPFAEPMAAFPHQEAVGLTGSDPRYSGEEVARRLGLERERPTVLLTFGGLGLQGLPYERLTDFPDWQFLTF
DPKAPALPNLQILDGQVWRPVDVMPLCRWVVSKPGYGTLAEALRCGTPMACVNRSGFAESPLLVEGLRRYGWHRILSPEE
FFAGSWDFLRDPPYPPQASEKLDRGGNEAIAAAIAAFLRQ

Sequences:

>Translated_360_residues
MAVNPIPLYVAATAHGFGHVTRLAAVVNTLRRQDAQILPIWVTPAPAWLLQRYGEGEFVHRPRGLDVGVVQPDGLQADLP
ATLAALKAFQAGAADLIREEAEFIRSQGVPLILADVPPIATAIAEAAGIPCWMASNFGWDFIYQDYGPQFQPLVAWIREL
YGRCQRLFRLPFAEPMAAFPHQEAVGLTGSDPRYSGEEVARRLGLERERPTVLLTFGGLGLQGLPYERLTDFPDWQFLTF
DPKAPALPNLQILDGQVWRPVDVMPLCRWVVSKPGYGTLAEALRCGTPMACVNRSGFAESPLLVEGLRRYGWHRILSPEE
FFAGSWDFLRDPPYPPQASEKLDRGGNEAIAAAIAAFLRQ
>Mature_359_residues
AVNPIPLYVAATAHGFGHVTRLAAVVNTLRRQDAQILPIWVTPAPAWLLQRYGEGEFVHRPRGLDVGVVQPDGLQADLPA
TLAALKAFQAGAADLIREEAEFIRSQGVPLILADVPPIATAIAEAAGIPCWMASNFGWDFIYQDYGPQFQPLVAWIRELY
GRCQRLFRLPFAEPMAAFPHQEAVGLTGSDPRYSGEEVARRLGLERERPTVLLTFGGLGLQGLPYERLTDFPDWQFLTFD
PKAPALPNLQILDGQVWRPVDVMPLCRWVVSKPGYGTLAEALRCGTPMACVNRSGFAESPLLVEGLRRYGWHRILSPEEF
FAGSWDFLRDPPYPPQASEKLDRGGNEAIAAAIAAFLRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39782; Mature: 39651

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNPIPLYVAATAHGFGHVTRLAAVVNTLRRQDAQILPIWVTPAPAWLLQRYGEGEFVH
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCEEE
RPRGLDVGVVQPDGLQADLPATLAALKAFQAGAADLIREEAEFIRSQGVPLILADVPPIA
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHH
TAIAEAAGIPCWMASNFGWDFIYQDYGPQFQPLVAWIRELYGRCQRLFRLPFAEPMAAFP
HHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
HQEAVGLTGSDPRYSGEEVARRLGLERERPTVLLTFGGLGLQGLPYERLTDFPDWQFLTF
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEE
DPKAPALPNLQILDGQVWRPVDVMPLCRWVVSKPGYGTLAEALRCGTPMACVNRSGFAES
CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCCC
PLLVEGLRRYGWHRILSPEEFFAGSWDFLRDPPYPPQASEKLDRGGNEAIAAAIAAFLRQ
CHHHHHHHHHCHHHCCCHHHHHCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AVNPIPLYVAATAHGFGHVTRLAAVVNTLRRQDAQILPIWVTPAPAWLLQRYGEGEFVH
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCEEE
RPRGLDVGVVQPDGLQADLPATLAALKAFQAGAADLIREEAEFIRSQGVPLILADVPPIA
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCHHH
TAIAEAAGIPCWMASNFGWDFIYQDYGPQFQPLVAWIRELYGRCQRLFRLPFAEPMAAFP
HHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
HQEAVGLTGSDPRYSGEEVARRLGLERERPTVLLTFGGLGLQGLPYERLTDFPDWQFLTF
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEE
DPKAPALPNLQILDGQVWRPVDVMPLCRWVVSKPGYGTLAEALRCGTPMACVNRSGFAES
CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCCC
PLLVEGLRRYGWHRILSPEEFFAGSWDFLRDPPYPPQASEKLDRGGNEAIAAAIAAFLRQ
CHHHHHHHHHCHHHCCCHHHHHCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA