Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605161

Identifier: 86605161

GI number: 86605161

Start: 461983

End: 462321

Strand: Reverse

Name: 86605161

Synonym: CYA_0442

Alternate gene names: NA

Gene position: 462321-461983 (Counterclockwise)

Preceding gene: 86605162

Following gene: 86605160

Centisome position: 15.76

GC content: 60.18

Gene sequence:

>339_bases
ATGTCGGATCTTTCTTTCTCAGAACAAGAACGGCTAAGACAGCTTGAGCTTGAACTGGAGCAGGCAACTGGGGCCTCTGG
GGAGCTGAGCTCGTCTCAGGGGAGAAATGCCATTCGCGCTTGGGCTGAGACGTGGGGGCGTCCGCTGCTGACGGTTTTGG
CCATTTTGGGCTGTATCCTGCTGGTGGGGCTGATCTTCCGGGTTTTCGGCACCGTTCTCAAGTGGACGGTGGTGGCGGGG
CTGGGCTATCTGCTCTACGTTTGGGTGGTGGCGCCGCGGCTGGGCCTTTCCACCGGAGCTAGGCCAAAGGCGGACGACAG
GGATCTGGACCGCTTTTGA

Upstream 100 bases:

>100_bases
GCCATGGCCCAAGAGATCCCGTCGGCGCGGGCCTAGCCTGCCGGGTTTGGGGAGCAGCCCGTAAGATGGAGATGGCGCTG
GATTCTGGAGACTGCTCCCT

Downstream 100 bases:

>100_bases
TGGGCAGGGATCCCTGGCGGGCTTATGCCTACCTGGCGGCAGCTATCTTGGGCTGGGCCACGGCGGCCAGCGCCTTTAAG
TTTGGCCTGCAACACCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSDLSFSEQERLRQLELELEQATGASGELSSSQGRNAIRAWAETWGRPLLTVLAILGCILLVGLIFRVFGTVLKWTVVAG
LGYLLYVWVVAPRLGLSTGARPKADDRDLDRF

Sequences:

>Translated_112_residues
MSDLSFSEQERLRQLELELEQATGASGELSSSQGRNAIRAWAETWGRPLLTVLAILGCILLVGLIFRVFGTVLKWTVVAG
LGYLLYVWVVAPRLGLSTGARPKADDRDLDRF
>Mature_111_residues
SDLSFSEQERLRQLELELEQATGASGELSSSQGRNAIRAWAETWGRPLLTVLAILGCILLVGLIFRVFGTVLKWTVVAGL
GYLLYVWVVAPRLGLSTGARPKADDRDLDRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12378; Mature: 12246

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSFSEQERLRQLELELEQATGASGELSSSQGRNAIRAWAETWGRPLLTVLAILGCIL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LVGLIFRVFGTVLKWTVVAGLGYLLYVWVVAPRLGLSTGARPKADDRDLDRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDLSFSEQERLRQLELELEQATGASGELSSSQGRNAIRAWAETWGRPLLTVLAILGCIL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LVGLIFRVFGTVLKWTVVAGLGYLLYVWVVAPRLGLSTGARPKADDRDLDRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA