| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is coaX
Identifier: 86605057
GI number: 86605057
Start: 356210
End: 356944
Strand: Reverse
Name: coaX
Synonym: CYA_0337
Alternate gene names: 86605057
Gene position: 356944-356210 (Counterclockwise)
Preceding gene: 86605058
Following gene: 86605056
Centisome position: 12.17
GC content: 68.44
Gene sequence:
>735_bases ATGAGTTCTGAGGCAGAGCGGTGGCTGGCCGCCGTGGTGGGCAACACCCACGTGCGCTGGGGCTGGTTTGCTGGCGAGAG CTTGGTGAAGGTGGAGCAGTTTCCCGCCCACCAACCCCTATCCTGGCCAGAAGAGACGGAGCTGTGGCTAGCTGCCGTTG GCTCTGCCCCTTTGCCGCCCCGATCCCCCTGGGTGCATTGCCTTGAGCTCTCCCAGGTGCCGCTGCGGGATCCCTACCCA AGCCTGGGGCTGGATCGGGCACTAGCTCTGTGGGCCGCCGGGATCCGCTACGGCTGGCCCTGCTTGGTCATCGACGCCGG CACCGCCTTGACCCTGACGGGAGCTGACGCCGAGGGATCCCTGGTGGGAGGAGCGATCCTGCCCGGCCTGGGGTTGCAGG CGCAGGCGCTGGCCGACCACACCGCCCGGCTGCCCAAAGTGGAGTGGGATCCCGGCGCTCCCATACCCCCCCGCTGGGCC AGGAACACTGGGGCCGCCATCCGCAGCGGCATTCTTCATACCCTGCTGGCCGGCTTGCGGGATTTTCTGGCCGACTGGCG CCGCCGCTTTCCCCAAGGCCCGCTGCTAGTAACCGGCGGCGATGGCGAGCTACTCTACCCCCACCTGCGGCCCCTTGACG CAGAGCTGCGCTGGGATCCCCACCTGGTGTTGCGGGGGATTGCCGGCTGCCGTCAGTTGCACCGCGTCGTCCGCAAGCCT TCTGGTGCAGAATAG
Upstream 100 bases:
>100_bases GCTCTGACGACGGCCTGGCAGCTCTCCACCGCCAAGCAATTGGCCGGGATCCCTGCCGATCAGCCGGTGGAGCTGTTTCG CGTGGAGGCGGAGCTGTTGC
Downstream 100 bases:
>100_bases AAGACAGTCTCTCCCAGCCGCCTGCGAGCGGGCAGCTTCTTGCTCAGGGATCCCATGGCCAACGGCAACTCCTTCGGCGT CTTGTTTTGCGTCACCACCT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSSEAERWLAAVVGNTHVRWGWFAGESLVKVEQFPAHQPLSWPEETELWLAAVGSAPLPPRSPWVHCLELSQVPLRDPYP SLGLDRALALWAAGIRYGWPCLVIDAGTALTLTGADAEGSLVGGAILPGLGLQAQALADHTARLPKVEWDPGAPIPPRWA RNTGAAIRSGILHTLLAGLRDFLADWRRRFPQGPLLVTGGDGELLYPHLRPLDAELRWDPHLVLRGIAGCRQLHRVVRKP SGAE
Sequences:
>Translated_244_residues MSSEAERWLAAVVGNTHVRWGWFAGESLVKVEQFPAHQPLSWPEETELWLAAVGSAPLPPRSPWVHCLELSQVPLRDPYP SLGLDRALALWAAGIRYGWPCLVIDAGTALTLTGADAEGSLVGGAILPGLGLQAQALADHTARLPKVEWDPGAPIPPRWA RNTGAAIRSGILHTLLAGLRDFLADWRRRFPQGPLLVTGGDGELLYPHLRPLDAELRWDPHLVLRGIAGCRQLHRVVRKP SGAE >Mature_243_residues SSEAERWLAAVVGNTHVRWGWFAGESLVKVEQFPAHQPLSWPEETELWLAAVGSAPLPPRSPWVHCLELSQVPLRDPYPS LGLDRALALWAAGIRYGWPCLVIDAGTALTLTGADAEGSLVGGAILPGLGLQAQALADHTARLPKVEWDPGAPIPPRWAR NTGAAIRSGILHTLLAGLRDFLADWRRRFPQGPLLVTGGDGELLYPHLRPLDAELRWDPHLVLRGIAGCRQLHRVVRKPS GAE
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_SYNJA (Q2JXC9)
Other databases:
- EMBL: CP000239 - RefSeq: YP_473820.1 - ProteinModelPortal: Q2JXC9 - SMR: Q2JXC9 - STRING: Q2JXC9 - GeneID: 3898005 - GenomeReviews: CP000239_GR - KEGG: cya:CYA_0337 - TIGR: CYA_0337 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: WPEETEL - ProtClustDB: PRK13331 - BioCyc: SSP321327:CYA_0337-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 26573; Mature: 26442
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: ACT_SITE 85-85 BINDING 79-79 BINDING 108-108 BINDING 163-163
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEAERWLAAVVGNTHVRWGWFAGESLVKVEQFPAHQPLSWPEETELWLAAVGSAPLPP CCCHHHHHHHHHHCCCEEEEEEECCCCCEEHHHCCCCCCCCCCCHHCEEEEEECCCCCCC RSPWVHCLELSQVPLRDPYPSLGLDRALALWAAGIRYGWPCLVIDAGTALTLTGADAEGS CCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCC LVGGAILPGLGLQAQALADHTARLPKVEWDPGAPIPPRWARNTGAAIRSGILHTLLAGLR EECCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DFLADWRRRFPQGPLLVTGGDGELLYPHLRPLDAELRWDPHLVLRGIAGCRQLHRVVRKP HHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SGAE CCCC >Mature Secondary Structure SSEAERWLAAVVGNTHVRWGWFAGESLVKVEQFPAHQPLSWPEETELWLAAVGSAPLPP CCHHHHHHHHHHCCCEEEEEEECCCCCEEHHHCCCCCCCCCCCHHCEEEEEECCCCCCC RSPWVHCLELSQVPLRDPYPSLGLDRALALWAAGIRYGWPCLVIDAGTALTLTGADAEGS CCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCC LVGGAILPGLGLQAQALADHTARLPKVEWDPGAPIPPRWARNTGAAIRSGILHTLLAGLR EECCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DFLADWRRRFPQGPLLVTGGDGELLYPHLRPLDAELRWDPHLVLRGIAGCRQLHRVVRKP HHHHHHHHHCCCCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SGAE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA