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The map label for this gene is 86605058

Identifier: 86605058

GI number: 86605058

Start: 356934

End: 357665

Strand: Reverse

Name: 86605058

Synonym: CYA_0338

Alternate gene names: NA

Gene position: 357665-356934 (Counterclockwise)

Preceding gene: 86605059

Following gene: 86605057

Centisome position: 12.2

GC content: 68.72

Gene sequence:

>732_bases
TTGGGTTGGCAAGATCCTCAGCTCGTGTCCACCTTTGCCATTCGATCGCTCAGCCTGCTGGCCTTGTTTCTGGGGGCAGG
GCTAGGGCTGCTGGCCGGATCCCGGCCAGAGGTTTCTGGGCGCGTTGGCGGGATCCCGTCCCCGGCCACGAGTTCCCCGG
CAGGCGCCTTGCCCCGCAACGGCGGGACGGAGGGGATCCCTGCTCCCGTCCAGCCGCAACCCTTGCCCAAGACGCTGCCG
GCCCTGGCGCGGCAGGCCATCGCCCACTACTTCGCCACTGGCCAGGTGCTGCCTGCTCCAGAAGAGATCCCGCCCCACTG
GCGGCGCCCGGCGGGAGTTTTTGTTACGGTGACCAGGGAGGGACGGCCCCGCGGCTGTTGGGGCAGCTTGGATCCCGGCG
GCGAGGATCTGGCCAGGGCCACCATCCGGGCGGCGGTGGGAGCTGTTACTCGCGACTGGCGCTATCGGCCCCTGCAACCC
GGCGAGCTGGAGTCGGCTTCTATTCAGGTGGCCATCGTGCGACGGGTGGTGCCCATCCCCTCTCTGGAGCAGGTGGATCC
CACCCGCATGGGCCTGTTCATTCGCGCGGGGACACGGGGGGCGGTGTTGCTGCCCGGAGAGGCTCTGACGACGGCCTGGC
AGCTCTCCACCGCCAAGCAATTGGCCGGGATCCCTGCCGATCAGCCGGTGGAGCTGTTTCGCGTGGAGGCGGAGCTGTTG
CATGAGTTCTGA

Upstream 100 bases:

>100_bases
CCCAGCAGCGGGTGGTGGTCAACTGCTCCGGGCGGGGCGACAAGGATCTGAACACCGTTTTCAAGTACTTGCAGAAGCGG
GGGCATAGCCTAGCCTAGAG

Downstream 100 bases:

>100_bases
GGCAGAGCGGTGGCTGGCCGCCGTGGTGGGCAACACCCACGTGCGCTGGGGCTGGTTTGCTGGCGAGAGCTTGGTGAAGG
TGGAGCAGTTTCCCGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGWQDPQLVSTFAIRSLSLLALFLGAGLGLLAGSRPEVSGRVGGIPSPATSSPAGALPRNGGTEGIPAPVQPQPLPKTLP
ALARQAIAHYFATGQVLPAPEEIPPHWRRPAGVFVTVTREGRPRGCWGSLDPGGEDLARATIRAAVGAVTRDWRYRPLQP
GELESASIQVAIVRRVVPIPSLEQVDPTRMGLFIRAGTRGAVLLPGEALTTAWQLSTAKQLAGIPADQPVELFRVEAELL
HEF

Sequences:

>Translated_243_residues
MGWQDPQLVSTFAIRSLSLLALFLGAGLGLLAGSRPEVSGRVGGIPSPATSSPAGALPRNGGTEGIPAPVQPQPLPKTLP
ALARQAIAHYFATGQVLPAPEEIPPHWRRPAGVFVTVTREGRPRGCWGSLDPGGEDLARATIRAAVGAVTRDWRYRPLQP
GELESASIQVAIVRRVVPIPSLEQVDPTRMGLFIRAGTRGAVLLPGEALTTAWQLSTAKQLAGIPADQPVELFRVEAELL
HEF
>Mature_242_residues
GWQDPQLVSTFAIRSLSLLALFLGAGLGLLAGSRPEVSGRVGGIPSPATSSPAGALPRNGGTEGIPAPVQPQPLPKTLPA
LARQAIAHYFATGQVLPAPEEIPPHWRRPAGVFVTVTREGRPRGCWGSLDPGGEDLARATIRAAVGAVTRDWRYRPLQPG
ELESASIQVAIVRRVVPIPSLEQVDPTRMGLFIRAGTRGAVLLPGEALTTAWQLSTAKQLAGIPADQPVELFRVEAELLH
EF

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733
- InterPro:   IPR004183 [H]

Pfam domain/function: PF01871 AMMECR1; PF02900 LigB [H]

EC number: NA

Molecular weight: Translated: 25752; Mature: 25621

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWQDPQLVSTFAIRSLSLLALFLGAGLGLLAGSRPEVSGRVGGIPSPATSSPAGALPRN
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGTEGIPAPVQPQPLPKTLPALARQAIAHYFATGQVLPAPEEIPPHWRRPAGVFVTVTRE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC
GRPRGCWGSLDPGGEDLARATIRAAVGAVTRDWRYRPLQPGELESASIQVAIVRRVVPIP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHCCCC
SLEQVDPTRMGLFIRAGTRGAVLLPGEALTTAWQLSTAKQLAGIPADQPVELFRVEAELL
CCCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HEF
HCC
>Mature Secondary Structure 
GWQDPQLVSTFAIRSLSLLALFLGAGLGLLAGSRPEVSGRVGGIPSPATSSPAGALPRN
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGTEGIPAPVQPQPLPKTLPALARQAIAHYFATGQVLPAPEEIPPHWRRPAGVFVTVTRE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC
GRPRGCWGSLDPGGEDLARATIRAAVGAVTRDWRYRPLQPGELESASIQVAIVRRVVPIP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHCCCC
SLEQVDPTRMGLFIRAGTRGAVLLPGEALTTAWQLSTAKQLAGIPADQPVELFRVEAELL
CCCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
HEF
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]