| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is fhuB
Identifier: 86361195
GI number: 86361195
Start: 523942
End: 525906
Strand: Direct
Name: fhuB
Synonym: RHE_PF00465
Alternate gene names: 86361195
Gene position: 523942-525906 (Clockwise)
Preceding gene: 86361194
Following gene: 86361197
Centisome position: 81.55
GC content: 68.19
Gene sequence:
>1965_bases ATGAAAGCGCAAATTTCCGGCTTTGGCGCGCCCGCCCTCGCGGCGCTGCTGCTGTTTTCCGGCCTCGGCCTGGCTCTCCT CGACCTGCTGCCGGCGTTGCCGCATCTGGAGACATCAGGCGGATACGACGCCCAGCACCTTCTCCTTCTCTATTCGACGC TTCCGCGCATGGCGACGGCCCTGATCACCGGCGCCGCCCTCGCGCTGTCGGGCACGATCCTGCAGCAGGTGCTGCGCAAT CCGCTCGCTTCGCCGACGACGCTTGGCGTTTCGGCCGGGGCGAATCTGGCGCTGGTCTCCGTCATGCTCGCCTTCCCCTC GCTGACGGGATGGGGCCGCGACGCGGTCGCGCTTGCCGGAAGTGCCGCTGCCGCCTTCGCCATCTTCTCGATCAGCGCCC GGCACGGCTTCTCGCCCTTTTCCCTCATCCTCTCGGGCATGATCATCGGCCTGTGGTGCGGAGCGGCGGCGGCCATCCTG ATATTGATGAACGATCAATATCTCTCCGGGATCTTCATCTGGGGCGCTGGATCGCTCTCGCAGCAAAGCTGGGCGATCCC GATATCGCTGCTGCCTAAGGTAGCCCTCCTCGCCGGCCTTGCCTTTCTCGCCGCGAGGCCGCTGGCGCTGAGCCAGCTCG GCGATGCCGGCGCGACGAGCCTCGGTCTGCCGATCAAATGGTCGCGCGGCGTCATCCTGGCAATCGCAATTGCGCTGAGC GCGCTGGTCACCAGTGCCGTCGGCGTTATCGGCTTCATCGGACTGGTCGCCCCGCAGATCGTTCGGCTGGCCGGCGCACG CCGCGTCGTCAGCCAATTGATCTGGTCGCCCATTGCCGGCGCCGGCCTTCTTCTTCTGACCGACGAGGCGATCAAGCTCC TTGCCCCCGGCGACTTCGTGCCGACAGGGGCAGTAACCGCGCTGCTCGGCGGACCGATCCTGATCGCTCTGTTGCCGCGC CTTGCCACCGCCAGCCGCACGCCGCCAGGCATGGCTTCGCCAAGAGTTGCCGTCGCCAACAGAACGGTATCGCTTGGCCT GCTGCTTCTCGCTGTCGCCGCGCTGGCAGCGGCAGCGATCTTCTTCGGACGCGCGCCGGACGGCGCCTGGGCGTGGCTGC CGGCCGCCGCGTGGGATGACATCCTTCCCCTTCGCCTGCCGCGCGTCGCCGCAGCTTTCGGCGCCGGAACCGTGCTCGGC GTGACCGGGCTGATCCTGCAGCGGCTGACCGGAAACGAAATGGCAAGCCCCGAAGTGCTCGGGGTTTCGGCCGGAGCGAC GCTCGGCGTCGCGGCCGCCATGTTCGCCTTTGCCGCGCCAGGACTGACGGTGCAGCTTGCCTTTGCCGGCGGCGGCGCGC TTGCGGTTCTACTGCTGATCTTCCTCTTGAGCGCCCGTTCGGGCTTCGGCCCGAACCGCGTGCTGCTCGCCGGCATCGCC TTCGGCGCGATCCTCGACGCCGGGATCGGCGTGCTGGCGGCCAGCGGCGATCCGCGCGGTCTGGCGCTGATCCGCTGGAT GTCGGGCTCGACCTATTTCGTCGACAACAACGTTGCCGCAAGCGCCCTCATCATTGCGCTTGCCTGCCTCATCGCGGCCT TTCTCGCCAGCCGATGGCTCGCCCTGCTGCAGCTCGGCTCGGAAACGGCGAGTGAACTCGGCCTCAGGATCGCTCCGGCA CGCGGCGTCCTCTTTGGGCTTTCGGCGATCATGACGGCCGCCGCCACGCTCGTCGTCGGCCCCTTGAGCTTCGTCGGACT GATGGCGCCCCACCTCGCCCATGGCCTCGGACTTCGCCGTCCCTCCATCCAGCTCCTCGCCGCCGCGCTGATCGGCGCGA CCCTGCTCGTCATCGCCGACTGGGCCGGCCGCATGATCGCCTTTCCCTACCAGGTCCCTGCGGGTTTGATCTCGGCCCTG GTTGGGGCGCCGATGCTGCTGTTCGTTCTGCGCGGGCGACCTTAA
Upstream 100 bases:
>100_bases AGCGGATCTCGGTCGTTCCAGGCGTGCTGATGTTTGGAATGGTCCAGGAAGCCCTGCGCTTTTCGACTTTGATGGTCGGC GTTCTGGAGACTGCTGCCTG
Downstream 100 bases:
>100_bases GGGGCCGCCGCCTTCATACCGCCAATGCTTCGGCGTCGACGCCTGCAGGGATGCGCAACGGACACGAAGGATCGGTCGCA GCGCGCCATACTGCCTCGAC
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 654; Mature: 654
Protein sequence:
>654_residues MKAQISGFGAPALAALLLFSGLGLALLDLLPALPHLETSGGYDAQHLLLLYSTLPRMATALITGAALALSGTILQQVLRN PLASPTTLGVSAGANLALVSVMLAFPSLTGWGRDAVALAGSAAAAFAIFSISARHGFSPFSLILSGMIIGLWCGAAAAIL ILMNDQYLSGIFIWGAGSLSQQSWAIPISLLPKVALLAGLAFLAARPLALSQLGDAGATSLGLPIKWSRGVILAIAIALS ALVTSAVGVIGFIGLVAPQIVRLAGARRVVSQLIWSPIAGAGLLLLTDEAIKLLAPGDFVPTGAVTALLGGPILIALLPR LATASRTPPGMASPRVAVANRTVSLGLLLLAVAALAAAAIFFGRAPDGAWAWLPAAAWDDILPLRLPRVAAAFGAGTVLG VTGLILQRLTGNEMASPEVLGVSAGATLGVAAAMFAFAAPGLTVQLAFAGGGALAVLLLIFLLSARSGFGPNRVLLAGIA FGAILDAGIGVLAASGDPRGLALIRWMSGSTYFVDNNVAASALIIALACLIAAFLASRWLALLQLGSETASELGLRIAPA RGVLFGLSAIMTAAATLVVGPLSFVGLMAPHLAHGLGLRRPSIQLLAAALIGATLLVIADWAGRMIAFPYQVPAGLISAL VGAPMLLFVLRGRP
Sequences:
>Translated_654_residues MKAQISGFGAPALAALLLFSGLGLALLDLLPALPHLETSGGYDAQHLLLLYSTLPRMATALITGAALALSGTILQQVLRN PLASPTTLGVSAGANLALVSVMLAFPSLTGWGRDAVALAGSAAAAFAIFSISARHGFSPFSLILSGMIIGLWCGAAAAIL ILMNDQYLSGIFIWGAGSLSQQSWAIPISLLPKVALLAGLAFLAARPLALSQLGDAGATSLGLPIKWSRGVILAIAIALS ALVTSAVGVIGFIGLVAPQIVRLAGARRVVSQLIWSPIAGAGLLLLTDEAIKLLAPGDFVPTGAVTALLGGPILIALLPR LATASRTPPGMASPRVAVANRTVSLGLLLLAVAALAAAAIFFGRAPDGAWAWLPAAAWDDILPLRLPRVAAAFGAGTVLG VTGLILQRLTGNEMASPEVLGVSAGATLGVAAAMFAFAAPGLTVQLAFAGGGALAVLLLIFLLSARSGFGPNRVLLAGIA FGAILDAGIGVLAASGDPRGLALIRWMSGSTYFVDNNVAASALIIALACLIAAFLASRWLALLQLGSETASELGLRIAPA RGVLFGLSAIMTAAATLVVGPLSFVGLMAPHLAHGLGLRRPSIQLLAAALIGATLLVIADWAGRMIAFPYQVPAGLISAL VGAPMLLFVLRGRP >Mature_654_residues MKAQISGFGAPALAALLLFSGLGLALLDLLPALPHLETSGGYDAQHLLLLYSTLPRMATALITGAALALSGTILQQVLRN PLASPTTLGVSAGANLALVSVMLAFPSLTGWGRDAVALAGSAAAAFAIFSISARHGFSPFSLILSGMIIGLWCGAAAAIL ILMNDQYLSGIFIWGAGSLSQQSWAIPISLLPKVALLAGLAFLAARPLALSQLGDAGATSLGLPIKWSRGVILAIAIALS ALVTSAVGVIGFIGLVAPQIVRLAGARRVVSQLIWSPIAGAGLLLLTDEAIKLLAPGDFVPTGAVTALLGGPILIALLPR LATASRTPPGMASPRVAVANRTVSLGLLLLAVAALAAAAIFFGRAPDGAWAWLPAAAWDDILPLRLPRVAAAFGAGTVLG VTGLILQRLTGNEMASPEVLGVSAGATLGVAAAMFAFAAPGLTVQLAFAGGGALAVLLLIFLLSARSGFGPNRVLLAGIA FGAILDAGIGVLAASGDPRGLALIRWMSGSTYFVDNNVAASALIIALACLIAAFLASRWLALLQLGSETASELGLRIAPA RGVLFGLSAIMTAAATLVVGPLSFVGLMAPHLAHGLGLRRPSIQLLAAALIGATLLVIADWAGRMIAFPYQVPAGLISAL VGAPMLLFVLRGRP
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=618, Percent_Identity=41.1003236245955, Blast_Score=355, Evalue=6e-99, Organism=Escherichia coli, GI1790740, Length=285, Percent_Identity=33.6842105263158, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1786805, Length=283, Percent_Identity=37.4558303886926, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1790741, Length=271, Percent_Identity=34.3173431734317, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788004, Length=279, Percent_Identity=34.0501792114695, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1786804, Length=269, Percent_Identity=33.0855018587361, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 65952; Mature: 65952
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQISGFGAPALAALLLFSGLGLALLDLLPALPHLETSGGYDAQHLLLLYSTLPRMATA CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LITGAALALSGTILQQVLRNPLASPTTLGVSAGANLALVSVMLAFPSLTGWGRDAVALAG HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCC SAAAAFAIFSISARHGFSPFSLILSGMIIGLWCGAAAAILILMNDQYLSGIFIWGAGSLS HHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHEHHEECCCCCCEEEEEECCCCC QQSWAIPISLLPKVALLAGLAFLAARPLALSQLGDAGATSLGLPIKWSRGVILAIAIALS CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHH ALVTSAVGVIGFIGLVAPQIVRLAGARRVVSQLIWSPIAGAGLLLLTDEAIKLLAPGDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHEECCCCCC PTGAVTALLGGPILIALLPRLATASRTPPGMASPRVAVANRTVSLGLLLLAVAALAAAAI CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH FFGRAPDGAWAWLPAAAWDDILPLRLPRVAAAFGAGTVLGVTGLILQRLTGNEMASPEVL HHCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEE GVSAGATLGVAAAMFAFAAPGLTVQLAFAGGGALAVLLLIFLLSARSGFGPNRVLLAGIA EECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FGAILDAGIGVLAASGDPRGLALIRWMSGSTYFVDNNVAASALIIALACLIAAFLASRWL HHHHHHCCCCEEEECCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH ALLQLGSETASELGLRIAPARGVLFGLSAIMTAAATLVVGPLSFVGLMAPHLAHGLGLRR HHHHHCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSIQLLAAALIGATLLVIADWAGRMIAFPYQVPAGLISALVGAPMLLFVLRGRP CHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKAQISGFGAPALAALLLFSGLGLALLDLLPALPHLETSGGYDAQHLLLLYSTLPRMATA CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LITGAALALSGTILQQVLRNPLASPTTLGVSAGANLALVSVMLAFPSLTGWGRDAVALAG HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCC SAAAAFAIFSISARHGFSPFSLILSGMIIGLWCGAAAAILILMNDQYLSGIFIWGAGSLS HHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHEHHEECCCCCCEEEEEECCCCC QQSWAIPISLLPKVALLAGLAFLAARPLALSQLGDAGATSLGLPIKWSRGVILAIAIALS CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHH ALVTSAVGVIGFIGLVAPQIVRLAGARRVVSQLIWSPIAGAGLLLLTDEAIKLLAPGDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHEECCCCCC PTGAVTALLGGPILIALLPRLATASRTPPGMASPRVAVANRTVSLGLLLLAVAALAAAAI CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH FFGRAPDGAWAWLPAAAWDDILPLRLPRVAAAFGAGTVLGVTGLILQRLTGNEMASPEVL HHCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEE GVSAGATLGVAAAMFAFAAPGLTVQLAFAGGGALAVLLLIFLLSARSGFGPNRVLLAGIA EECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FGAILDAGIGVLAASGDPRGLALIRWMSGSTYFVDNNVAASALIIALACLIAAFLASRWL HHHHHHCCCCEEEECCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH ALLQLGSETASELGLRIAPARGVLFGLSAIMTAAATLVVGPLSFVGLMAPHLAHGLGLRR HHHHHCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSIQLLAAALIGATLLVIADWAGRMIAFPYQVPAGLISALVGAPMLLFVLRGRP CHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]