Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860079

Identifier: 85860079

GI number: 85860079

Start: 2287250

End: 2288221

Strand: Direct

Name: 85860079

Synonym: SYN_01554

Alternate gene names: NA

Gene position: 2287250-2288221 (Clockwise)

Preceding gene: 85860078

Following gene: 85860080

Centisome position: 71.94

GC content: 53.19

Gene sequence:

>972_bases
ATGGCAAAGATGATTAAAAAATCGGGGCAACGAGGAATCGCCCTGATTGTTGTCCTCTGCATGACTTCGATCATGGTGGC
CGCCGCGGTTCAAATGATTTCCCAGACCCGGCGGGAGATCACCGAAACGACGAATCTCAGGGACGGCCTGCAGGCGCTGT
ATCTGGCCCGGTCGGGAGTCGCTTTCAGCGAAGCCAGCCTCAATGCGGAGAAGACTAACTATGACGGGCTGGATCAGCCC
TGGGCGGATGCGAAAACCTGGTCGGCCAGATTTAATGCCTTGATCGAGGAAGGTCAAAGCTATATCGTCATTGAGGATGA
AACGGGAAAGATTCCGATCAATTTCCTGATCAATAAGGATGGCGCGGAGAACGCGGAAATCCGAAATCTGCTGGTCCGCT
TTCTGAACTTGCCGGAATGGAACCTGACGGAAGAACAGAGTGGAATCATTGTCGATTCGATAAAAGACTGGATGATATCG
AATTCCCAGCCGTCGGAAGGTTCAGATTCTTCCGACACGGAATCAGAGCCCCAGAGGAAAGGTCCATTTCGATTTCCGGA
AGAGATTCTGAAAACCGGCGCCGTGTCCCGGGATCTTCTCTATGGAACGGCGGGGAAACCAGGACTATGTGCTTATGTCA
CCCTTTACGGCAAGGGAAAAATCAACATCAACACGGCGCCCGGACCGGTTCTGATGGCTCTCTTTCCGGGGATCAGCAAG
GACACGCTGGAGCAGATCGATTTCTCCAGGCGCAGGGGGGAGGCTAAACTCGATGACCCGGCCTGGTACAGACAGGTTAT
CGGCACATCCGGCCTGAATCCGGCTTCGGAACTGATCATGACCAGAAGTGAAGCATTCCGGATCACCTCCACCGGCGTGC
TGGGAAGCTGTCGAAGAACCGTAACGGGAATCTTGGAAAAGGACGGAAAATCGGAGAAGTTCAAGCTCCGGTTTCTGTAT
GGAAATTCATGA

Upstream 100 bases:

>100_bases
TTCTGGAACTCACACTGGTCAATCCTGAGGATGAGAGCAAGCCGTTTCACTTCATGACCCGAGTCCATCCAGCCAACATG
AGTCCGCAGGAGTCCTGAAC

Downstream 100 bases:

>100_bases
ATAAGAAAACCATTGGCATTGATATCGGTACCGCCTGTTTAAAGGCGGTTTCATTGACCTTCGACTACAAAAGCAGGAAA
AGTATCGCGGCATCCGCTCT

Product: general secretory pathway protein K

Products: NA

Alternate protein names: Type II Secretory Pathway Component PulK-Like Protein; General Secretory Pathway Protein K

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAKMIKKSGQRGIALIVVLCMTSIMVAAAVQMISQTRREITETTNLRDGLQALYLARSGVAFSEASLNAEKTNYDGLDQP
WADAKTWSARFNALIEEGQSYIVIEDETGKIPINFLINKDGAENAEIRNLLVRFLNLPEWNLTEEQSGIIVDSIKDWMIS
NSQPSEGSDSSDTESEPQRKGPFRFPEEILKTGAVSRDLLYGTAGKPGLCAYVTLYGKGKININTAPGPVLMALFPGISK
DTLEQIDFSRRRGEAKLDDPAWYRQVIGTSGLNPASELIMTRSEAFRITSTGVLGSCRRTVTGILEKDGKSEKFKLRFLY
GNS

Sequences:

>Translated_323_residues
MAKMIKKSGQRGIALIVVLCMTSIMVAAAVQMISQTRREITETTNLRDGLQALYLARSGVAFSEASLNAEKTNYDGLDQP
WADAKTWSARFNALIEEGQSYIVIEDETGKIPINFLINKDGAENAEIRNLLVRFLNLPEWNLTEEQSGIIVDSIKDWMIS
NSQPSEGSDSSDTESEPQRKGPFRFPEEILKTGAVSRDLLYGTAGKPGLCAYVTLYGKGKININTAPGPVLMALFPGISK
DTLEQIDFSRRRGEAKLDDPAWYRQVIGTSGLNPASELIMTRSEAFRITSTGVLGSCRRTVTGILEKDGKSEKFKLRFLY
GNS
>Mature_322_residues
AKMIKKSGQRGIALIVVLCMTSIMVAAAVQMISQTRREITETTNLRDGLQALYLARSGVAFSEASLNAEKTNYDGLDQPW
ADAKTWSARFNALIEEGQSYIVIEDETGKIPINFLINKDGAENAEIRNLLVRFLNLPEWNLTEEQSGIIVDSIKDWMISN
SQPSEGSDSSDTESEPQRKGPFRFPEEILKTGAVSRDLLYGTAGKPGLCAYVTLYGKGKININTAPGPVLMALFPGISKD
TLEQIDFSRRRGEAKLDDPAWYRQVIGTSGLNPASELIMTRSEAFRITSTGVLGSCRRTVTGILEKDGKSEKFKLRFLYG
NS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35632; Mature: 35501

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKMIKKSGQRGIALIVVLCMTSIMVAAAVQMISQTRREITETTNLRDGLQALYLARSGV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFSEASLNAEKTNYDGLDQPWADAKTWSARFNALIEEGQSYIVIEDETGKIPINFLINKD
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECC
GAENAEIRNLLVRFLNLPEWNLTEEQSGIIVDSIKDWMISNSQPSEGSDSSDTESEPQRK
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
GPFRFPEEILKTGAVSRDLLYGTAGKPGLCAYVTLYGKGKININTAPGPVLMALFPGISK
CCCCCHHHHHHCCCCCHHHEEECCCCCCEEEEEEEEECCEEEEECCCCHHHHHHCCCCCH
DTLEQIDFSRRRGEAKLDDPAWYRQVIGTSGLNPASELIMTRSEAFRITSTGVLGSCRRT
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHH
VTGILEKDGKSEKFKLRFLYGNS
HHHHHHCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
AKMIKKSGQRGIALIVVLCMTSIMVAAAVQMISQTRREITETTNLRDGLQALYLARSGV
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFSEASLNAEKTNYDGLDQPWADAKTWSARFNALIEEGQSYIVIEDETGKIPINFLINKD
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECC
GAENAEIRNLLVRFLNLPEWNLTEEQSGIIVDSIKDWMISNSQPSEGSDSSDTESEPQRK
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
GPFRFPEEILKTGAVSRDLLYGTAGKPGLCAYVTLYGKGKININTAPGPVLMALFPGISK
CCCCCHHHHHHCCCCCHHHEEECCCCCCEEEEEEEEECCEEEEECCCCHHHHHHCCCCCH
DTLEQIDFSRRRGEAKLDDPAWYRQVIGTSGLNPASELIMTRSEAFRITSTGVLGSCRRT
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHH
VTGILEKDGKSEKFKLRFLYGNS
HHHHHHCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA