Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860080

Identifier: 85860080

GI number: 85860080

Start: 2288218

End: 2289747

Strand: Direct

Name: 85860080

Synonym: SYN_01555

Alternate gene names: NA

Gene position: 2288218-2289747 (Clockwise)

Preceding gene: 85860079

Following gene: 85860081

Centisome position: 71.97

GC content: 53.14

Gene sequence:

>1530_bases
ATGAATAAGAAAACCATTGGCATTGATATCGGTACCGCCTGTTTAAAGGCGGTTTCATTGACCTTCGACTACAAAAGCAG
GAAAAGTATCGCGGCATCCGCTCTGATCGACCTGGATGCTGCCGATGGCCTGGAACAGGCTCTGCAGAAACTTTTCACGG
ACAAGCATTTTAAAGAAGGGGAATGCGTCTTTTCCATTCCAGCGGGCTCCTGTTCGTTTCGCAATCTTTCCCTTCCATTC
ACTGAAGAAAAGACGATCGATGAGATCATCACATATGAAATGGAGCCTCACATTCCGGATCCCATCGAAACCGTTCTGGT
CGATTCTCTGCCGCCTCGTCACACCCCCGAATCGACAACGGTTCTGGCTGCCGCGGCCAGAAAGCAGGATGTTCAGGAGC
GCGTGCGCTATGCGGCCGGCATCGGCATGGCTGTTGTCGACACGGACGCTGTTCCCATCGCTATGAATCTTCTGGAAAAG
AATATCCCCAATGCTTCCGGGATTCTTCTGGATATCGGCGCACATGCTTCCGTTGCCGTTTTCTTTCAGAGCGGCTCCAT
CGTTCACGTCAGATCCTTTCCCTGGGGGATCGCGGACTCTCCCGGAACATTCGGGTTTCTTCCGCATTCCGACCCCGATG
AGAACAGGAAAAGCCCAGCCGCAGAAAAGGACGGGGAGTTGCAGAACCAGGATAGAAAAGAACGGAAACGATTTGAGTTT
TGCAGACAGATCGCCGATACGCTGCAATTCCTCGCGGAAAACAGTCTTCTCGAAGAAATGCCCTCCCGCATTTACCTGAC
CGGAGGCGGCGCGCTGAGCGCGACCCTGCGGGAGGACCTGGAAAAGTTCTTCAAAACTCCGGTAGAGGTTGTCGACCTGC
TCAAAATGAAGGGCATTCCTCTTCCGGGGAAGAACCGACTCTCCTGGAACGCGCCTCTCATGAATCAGGCTCTGGCCCTC
GCCCTTCGAGGCGGCAACGGATCGGCGGGTTTCAATTTCAATAAGACCGAAAAAGCCGTCACAAATGCAAGAAACGGGAT
GAAGAGTCAACTCCGGTGGACCGCTCTGATGGCGGTTATCCTGTTCTTTGCCCTGGGAAGCAACCTGGCCGCCGGATATT
ACGCGGACAGCAGGAAACTTCGCCATCTCAAGGAAGAAACCACGAAAACCTTTAAAAACTGCTGTCCGGAAGTCACCCGG
ATCGTCGATCCGGTTCGTCAGTTACAGCAGAAGATCATTGAAGCCCGGGGGTTTTCCAGGGGAGCGGAACAGGGCTCACT
TTTCCTCGACTCCTGGAAAAAAGCGATGGACACATTGCCCGAGGCGTCCGGGATTGTGATCAGGGAACTCAGCTATAATC
AGATCGTCCTGGAAATCTCCGGAGAGGCGTCCGACTTCCAGGCCGTCACCCGCTGGAAAGGCGAACTGGAAAAATCCCGA
TCCTTCTCCAACATCCAGATGCAGTTTGGCAGCGGCACGAACAAAGACGCGAAAAAAACGTTCAAATTAAGGATGACCCA
TGTTCTTTAA

Upstream 100 bases:

>100_bases
CCACCGGCGTGCTGGGAAGCTGTCGAAGAACCGTAACGGGAATCTTGGAAAAGGACGGAAAATCGGAGAAGTTCAAGCTC
CGGTTTCTGTATGGAAATTC

Downstream 100 bases:

>100_bases
AACTTTTATGCCATACTGGTCCGGTCTGCGGCAGCGGGAGCGAATCGTCCTGGGCGGAGGGTTGATCTGCCTTTTTCTGC
TCCTGCTTACTCATTTTATT

Product: general secretory pathway protein L

Products: NA

Alternate protein names: General Secretory Pathway Protein L

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MNKKTIGIDIGTACLKAVSLTFDYKSRKSIAASALIDLDAADGLEQALQKLFTDKHFKEGECVFSIPAGSCSFRNLSLPF
TEEKTIDEIITYEMEPHIPDPIETVLVDSLPPRHTPESTTVLAAAARKQDVQERVRYAAGIGMAVVDTDAVPIAMNLLEK
NIPNASGILLDIGAHASVAVFFQSGSIVHVRSFPWGIADSPGTFGFLPHSDPDENRKSPAAEKDGELQNQDRKERKRFEF
CRQIADTLQFLAENSLLEEMPSRIYLTGGGALSATLREDLEKFFKTPVEVVDLLKMKGIPLPGKNRLSWNAPLMNQALAL
ALRGGNGSAGFNFNKTEKAVTNARNGMKSQLRWTALMAVILFFALGSNLAAGYYADSRKLRHLKEETTKTFKNCCPEVTR
IVDPVRQLQQKIIEARGFSRGAEQGSLFLDSWKKAMDTLPEASGIVIRELSYNQIVLEISGEASDFQAVTRWKGELEKSR
SFSNIQMQFGSGTNKDAKKTFKLRMTHVL

Sequences:

>Translated_509_residues
MNKKTIGIDIGTACLKAVSLTFDYKSRKSIAASALIDLDAADGLEQALQKLFTDKHFKEGECVFSIPAGSCSFRNLSLPF
TEEKTIDEIITYEMEPHIPDPIETVLVDSLPPRHTPESTTVLAAAARKQDVQERVRYAAGIGMAVVDTDAVPIAMNLLEK
NIPNASGILLDIGAHASVAVFFQSGSIVHVRSFPWGIADSPGTFGFLPHSDPDENRKSPAAEKDGELQNQDRKERKRFEF
CRQIADTLQFLAENSLLEEMPSRIYLTGGGALSATLREDLEKFFKTPVEVVDLLKMKGIPLPGKNRLSWNAPLMNQALAL
ALRGGNGSAGFNFNKTEKAVTNARNGMKSQLRWTALMAVILFFALGSNLAAGYYADSRKLRHLKEETTKTFKNCCPEVTR
IVDPVRQLQQKIIEARGFSRGAEQGSLFLDSWKKAMDTLPEASGIVIRELSYNQIVLEISGEASDFQAVTRWKGELEKSR
SFSNIQMQFGSGTNKDAKKTFKLRMTHVL
>Mature_509_residues
MNKKTIGIDIGTACLKAVSLTFDYKSRKSIAASALIDLDAADGLEQALQKLFTDKHFKEGECVFSIPAGSCSFRNLSLPF
TEEKTIDEIITYEMEPHIPDPIETVLVDSLPPRHTPESTTVLAAAARKQDVQERVRYAAGIGMAVVDTDAVPIAMNLLEK
NIPNASGILLDIGAHASVAVFFQSGSIVHVRSFPWGIADSPGTFGFLPHSDPDENRKSPAAEKDGELQNQDRKERKRFEF
CRQIADTLQFLAENSLLEEMPSRIYLTGGGALSATLREDLEKFFKTPVEVVDLLKMKGIPLPGKNRLSWNAPLMNQALAL
ALRGGNGSAGFNFNKTEKAVTNARNGMKSQLRWTALMAVILFFALGSNLAAGYYADSRKLRHLKEETTKTFKNCCPEVTR
IVDPVRQLQQKIIEARGFSRGAEQGSLFLDSWKKAMDTLPEASGIVIRELSYNQIVLEISGEASDFQAVTRWKGELEKSR
SFSNIQMQFGSGTNKDAKKTFKLRMTHVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56241; Mature: 56241

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKTIGIDIGTACLKAVSLTFDYKSRKSIAASALIDLDAADGLEQALQKLFTDKHFKEG
CCCCEEEEEHHHHHHHHHHHEECCHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCC
ECVFSIPAGSCSFRNLSLPFTEEKTIDEIITYEMEPHIPDPIETVLVDSLPPRHTPESTT
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHH
VLAAAARKQDVQERVRYAAGIGMAVVDTDAVPIAMNLLEKNIPNASGILLDIGAHASVAV
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEE
FFQSGSIVHVRSFPWGIADSPGTFGFLPHSDPDENRKSPAAEKDGELQNQDRKERKRFEF
EEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
CRQIADTLQFLAENSLLEEMPSRIYLTGGGALSATLREDLEKFFKTPVEVVDLLKMKGIP
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCC
LPGKNRLSWNAPLMNQALALALRGGNGSAGFNFNKTEKAVTNARNGMKSQLRWTALMAVI
CCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LFFALGSNLAAGYYADSRKLRHLKEETTKTFKNCCPEVTRIVDPVRQLQQKIIEARGFSR
HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAEQGSLFLDSWKKAMDTLPEASGIVIRELSYNQIVLEISGEASDFQAVTRWKGELEKSR
CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCC
SFSNIQMQFGSGTNKDAKKTFKLRMTHVL
CCCEEEEEECCCCCHHHHHHHHHEEHHCC
>Mature Secondary Structure
MNKKTIGIDIGTACLKAVSLTFDYKSRKSIAASALIDLDAADGLEQALQKLFTDKHFKEG
CCCCEEEEEHHHHHHHHHHHEECCHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCC
ECVFSIPAGSCSFRNLSLPFTEEKTIDEIITYEMEPHIPDPIETVLVDSLPPRHTPESTT
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHH
VLAAAARKQDVQERVRYAAGIGMAVVDTDAVPIAMNLLEKNIPNASGILLDIGAHASVAV
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEE
FFQSGSIVHVRSFPWGIADSPGTFGFLPHSDPDENRKSPAAEKDGELQNQDRKERKRFEF
EEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
CRQIADTLQFLAENSLLEEMPSRIYLTGGGALSATLREDLEKFFKTPVEVVDLLKMKGIP
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCC
LPGKNRLSWNAPLMNQALALALRGGNGSAGFNFNKTEKAVTNARNGMKSQLRWTALMAVI
CCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LFFALGSNLAAGYYADSRKLRHLKEETTKTFKNCCPEVTRIVDPVRQLQQKIIEARGFSR
HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAEQGSLFLDSWKKAMDTLPEASGIVIRELSYNQIVLEISGEASDFQAVTRWKGELEKSR
CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCC
SFSNIQMQFGSGTNKDAKKTFKLRMTHVL
CCCEEEEEECCCCCHHHHHHHHHEEHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA