| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860078
Identifier: 85860078
GI number: 85860078
Start: 2286585
End: 2287247
Strand: Direct
Name: 85860078
Synonym: SYN_01553
Alternate gene names: NA
Gene position: 2286585-2287247 (Clockwise)
Preceding gene: 85860077
Following gene: 85860079
Centisome position: 71.92
GC content: 52.49
Gene sequence:
>663_bases ATGAGGCATCCTCCGGAAACAAGTAAAAACGGCGGAGAGGCGGGGTTCACGCTCTTCGAGATTCTAGTCGCACTTTTTAT CCTTACGCTTATTTTTTCCGTCCTTTTTGCCTCTTATTCAGGAACGTTGAAAGTGACCCGCGACTGGGAAGATACCGGGA GGGTCTTCAGTATGGCCAGAAGCTCCATGGAACGCATGATGAAGGATATTGAATCCGCTTATCCCTCGGGGCAGACGTGT CCCTTTATTCTGGAGCAGGAGGTCATCAGAGAAAAGCCTTTCCCCCGCTTGAGCTTCCATTCCTTAAGCCGGACGAATCC GGAGGGGCCGGAAACACCGCCGGCGGGGATCAGCAACATTACCTATTCCGTAAGACTGAATTCGGAAAAAGGAGATTATG AACTTGCCCGAAGTGAAACTTCGGACAGCGACGATATCGCGGGATCGGATTTCGTGATCTGCCGCGGCCTTTCCTCTATC ACTTATCGATTCTACGACCGCGCCGGCAGAGACATATCCGATACCTTCTGCTCCTCCGATCAGAAGAGTCCCCCTGCCAG TGTCGTTCTGGAACTCACACTGGTCAATCCTGAGGATGAGAGCAAGCCGTTTCACTTCATGACCCGAGTCCATCCAGCCA ACATGAGTCCGCAGGAGTCCTGA
Upstream 100 bases:
>100_bases TCTCGACCCTGAAGAAGGTGGAGGTGACGGTTTTGGATACCCTTTCGGAAAAACGCGAAAGTTTCCGTCTCACCAGCCTC CAGTACAGGGAGGAATCCCC
Downstream 100 bases:
>100_bases ACATGGCAAAGATGATTAAAAAATCGGGGCAACGAGGAATCGCCCTGATTGTTGTCCTCTGCATGACTTCGATCATGGTG GCCGCCGCGGTTCAAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRHPPETSKNGGEAGFTLFEILVALFILTLIFSVLFASYSGTLKVTRDWEDTGRVFSMARSSMERMMKDIESAYPSGQTC PFILEQEVIREKPFPRLSFHSLSRTNPEGPETPPAGISNITYSVRLNSEKGDYELARSETSDSDDIAGSDFVICRGLSSI TYRFYDRAGRDISDTFCSSDQKSPPASVVLELTLVNPEDESKPFHFMTRVHPANMSPQES
Sequences:
>Translated_220_residues MRHPPETSKNGGEAGFTLFEILVALFILTLIFSVLFASYSGTLKVTRDWEDTGRVFSMARSSMERMMKDIESAYPSGQTC PFILEQEVIREKPFPRLSFHSLSRTNPEGPETPPAGISNITYSVRLNSEKGDYELARSETSDSDDIAGSDFVICRGLSSI TYRFYDRAGRDISDTFCSSDQKSPPASVVLELTLVNPEDESKPFHFMTRVHPANMSPQES >Mature_220_residues MRHPPETSKNGGEAGFTLFEILVALFILTLIFSVLFASYSGTLKVTRDWEDTGRVFSMARSSMERMMKDIESAYPSGQTC PFILEQEVIREKPFPRLSFHSLSRTNPEGPETPPAGISNITYSVRLNSEKGDYELARSETSDSDDIAGSDFVICRGLSSI TYRFYDRAGRDISDTFCSSDQKSPPASVVLELTLVNPEDESKPFHFMTRVHPANMSPQES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24599; Mature: 24599
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHPPETSKNGGEAGFTLFEILVALFILTLIFSVLFASYSGTLKVTRDWEDTGRVFSMAR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH SSMERMMKDIESAYPSGQTCPFILEQEVIREKPFPRLSFHSLSRTNPEGPETPPAGISNI HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCE TYSVRLNSEKGDYELARSETSDSDDIAGSDFVICRGLSSITYRFYDRAGRDISDTFCSSD EEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHCCC QKSPPASVVLELTLVNPEDESKPFHFMTRVHPANMSPQES CCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MRHPPETSKNGGEAGFTLFEILVALFILTLIFSVLFASYSGTLKVTRDWEDTGRVFSMAR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH SSMERMMKDIESAYPSGQTCPFILEQEVIREKPFPRLSFHSLSRTNPEGPETPPAGISNI HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCE TYSVRLNSEKGDYELARSETSDSDDIAGSDFVICRGLSSITYRFYDRAGRDISDTFCSSD EEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHCCC QKSPPASVVLELTLVNPEDESKPFHFMTRVHPANMSPQES CCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA