| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is hisD
Identifier: 85059107
GI number: 85059107
Start: 1871356
End: 1872669
Strand: Reverse
Name: hisD
Synonym: SG1129
Alternate gene names: 85059107
Gene position: 1872669-1871356 (Counterclockwise)
Preceding gene: 85059108
Following gene: 85059106
Centisome position: 44.9
GC content: 64.99
Gene sequence:
>1314_bases ATGACCGCCACAGTTTTTTCCCAACCGGTGCGCTGGCGCGATTGCGATGCGGCCCAACAGGCGCGACTCCTGACCCGTCC GGCGGTGGATGCCCAGGCGGACATCAGCGCCACCGTCAGCGCCATAGTGCAGCAGGTCCGTCAGGAGGGCGACGCTGCGC TGCGGGCCTTGAATGCCTGTTTTGACCGCACCGAGACGCCGCAACTGCGCATTACGGATGCGGAGGTGGCGCAAGCCGCC CAGCGTTTGTCGCCGGCGATTAAGCAGGCGATGGCGGCGGCTGTGGCGAATATCGATACCTTTCACCGCGCCCAGCAGTT GCCGGAGGTCGATGTGGAAACCCAGCCCGGCGTGCGCTGTCACCAGTTGACCCGGCCGGTGGCCGCGGTGGGGCTCTACA TACCGGGCGGATCGGCGCCGCTGCTCTCCACGGTGCTGATGCTGGCGACGCCGGCGCGCATCGCCGGCTGCCGGCGGGTG ATCCTCTGCTCACCGCCGCCCATCGCCGATGAAATTCTGTATGCCGCATCGCTGTGCGGAGTGCAGGACATTTATCAGGT CGGCGGCGCGCAGGCAATTGCCGCCATGGCGTTCGGCACCGAGACCATCGCCAAGGTCGACAAGATTTTTGGCCCGGGCA ATGCCTGGGTGACCGAGGCGAAACGCCAGGTCAGCCAGTGCCTGGACGGGGCCGCTATCGATATGCCCGCCGGGCCGTCT GAAGTGCTTATCATCGCCGATGCTCAGGCCAATCCGGCGTTTGTCGCTGCCGACCTGCTGTCGCAGGCGGAACACGGCCC CGACTCGCAGGTGATCCTGCTTACCCCCGACGCAAATCTGGCGCAGCGGGTGGCTCGGGAAACCGAACGTCAGTTGCAAT CACTCTCCCGCGCCGCTATCGCCCACCAGGCGCTGGCCGGCAGCCGTCTTATCATTGCCGCCGATCTGGCCGAATGCGTC GCCATTAGTAACCGCTATGGACCGGAGCATCTGATTATTCAAACCCGCGATGCGGGGCGCTGGGTAGAGGACATTACCAG CGCCGGCTCCATTTTCCTCGGCGACTGGTCGCCTGAGTCCGCGGGCGATTACGCCTCCGGCACCAATCAAGTCCTGCCGA CCTATGGTTATACCACCACCTGTTCCAGCCTGGGGCTGGCGGATTTCCAAAAACGGATGACGGTGCAAGAACTTACCCCC GCCGGTCTGCTGGCACTGGCGCCGACGGTTGAAACCCTGGCGCAGGCCGAGCGCCTGACCGCACACAAAAACGCCATCAC ACTGCGCGTTGCCGCGCTCAAGGAGCCGCAATGA
Upstream 100 bases:
>100_bases GCAGCGAAACCCTGTTCTGGGAGACCATGGAAAATCTGAAGGCCCTCGGCGCCAGCTCGATTCTGGTGTTGCCCATTGAA AAGATGATGGAGTGAGAACC
Downstream 100 bases:
>100_bases GCATTCATCACTTAGCCCGCGCCAACGTGCTGGCGCTGGAGCCTTATCTCTCCGCGCGCCGGCTGGGCGGCCAAGGCAAT ATTTGGCTGAACGCCAATGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTATVFSQPVRWRDCDAAQQARLLTRPAVDAQADISATVSAIVQQVRQEGDAALRALNACFDRTETPQLRITDAEVAQAA QRLSPAIKQAMAAAVANIDTFHRAQQLPEVDVETQPGVRCHQLTRPVAAVGLYIPGGSAPLLSTVLMLATPARIAGCRRV ILCSPPPIADEILYAASLCGVQDIYQVGGAQAIAAMAFGTETIAKVDKIFGPGNAWVTEAKRQVSQCLDGAAIDMPAGPS EVLIIADAQANPAFVAADLLSQAEHGPDSQVILLTPDANLAQRVARETERQLQSLSRAAIAHQALAGSRLIIAADLAECV AISNRYGPEHLIIQTRDAGRWVEDITSAGSIFLGDWSPESAGDYASGTNQVLPTYGYTTTCSSLGLADFQKRMTVQELTP AGLLALAPTVETLAQAERLTAHKNAITLRVAALKEPQ
Sequences:
>Translated_437_residues MTATVFSQPVRWRDCDAAQQARLLTRPAVDAQADISATVSAIVQQVRQEGDAALRALNACFDRTETPQLRITDAEVAQAA QRLSPAIKQAMAAAVANIDTFHRAQQLPEVDVETQPGVRCHQLTRPVAAVGLYIPGGSAPLLSTVLMLATPARIAGCRRV ILCSPPPIADEILYAASLCGVQDIYQVGGAQAIAAMAFGTETIAKVDKIFGPGNAWVTEAKRQVSQCLDGAAIDMPAGPS EVLIIADAQANPAFVAADLLSQAEHGPDSQVILLTPDANLAQRVARETERQLQSLSRAAIAHQALAGSRLIIAADLAECV AISNRYGPEHLIIQTRDAGRWVEDITSAGSIFLGDWSPESAGDYASGTNQVLPTYGYTTTCSSLGLADFQKRMTVQELTP AGLLALAPTVETLAQAERLTAHKNAITLRVAALKEPQ >Mature_436_residues TATVFSQPVRWRDCDAAQQARLLTRPAVDAQADISATVSAIVQQVRQEGDAALRALNACFDRTETPQLRITDAEVAQAAQ RLSPAIKQAMAAAVANIDTFHRAQQLPEVDVETQPGVRCHQLTRPVAAVGLYIPGGSAPLLSTVLMLATPARIAGCRRVI LCSPPPIADEILYAASLCGVQDIYQVGGAQAIAAMAFGTETIAKVDKIFGPGNAWVTEAKRQVSQCLDGAAIDMPAGPSE VLIIADAQANPAFVAADLLSQAEHGPDSQVILLTPDANLAQRVARETERQLQSLSRAAIAHQALAGSRLIIAADLAECVA ISNRYGPEHLIIQTRDAGRWVEDITSAGSIFLGDWSPESAGDYASGTNQVLPTYGYTTTCSSLGLADFQKRMTVQELTPA GLLALAPTVETLAQAERLTAHKNAITLRVAALKEPQ
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=430, Percent_Identity=72.3255813953488, Blast_Score=640, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319819, Length=449, Percent_Identity=43.2071269487751, Blast_Score=338, Evalue=9e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46253; Mature: 46122
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVFSQPVRWRDCDAAQQARLLTRPAVDAQADISATVSAIVQQVRQEGDAALRALNAC CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDRTETPQLRITDAEVAQAAQRLSPAIKQAMAAAVANIDTFHRAQQLPEVDVETQPGVRC HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH HQLTRPVAAVGLYIPGGSAPLLSTVLMLATPARIAGCRRVILCSPPPIADEILYAASLCG HHHHCCHHHEEEEECCCCCHHHHHHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHHC VQDIYQVGGAQAIAAMAFGTETIAKVDKIFGPGNAWVTEAKRQVSQCLDGAAIDMPAGPS HHHHHHHCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCCCCCC EVLIIADAQANPAFVAADLLSQAEHGPDSQVILLTPDANLAQRVARETERQLQSLSRAAI CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH AHQALAGSRLIIAADLAECVAISNRYGPEHLIIQTRDAGRWVEDITSAGSIFLGDWSPES HHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCCCC AGDYASGTNQVLPTYGYTTTCSSLGLADFQKRMTVQELTPAGLLALAPTVETLAQAERLT CCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AHKNAITLRVAALKEPQ HHCCEEEEEEECCCCCC >Mature Secondary Structure TATVFSQPVRWRDCDAAQQARLLTRPAVDAQADISATVSAIVQQVRQEGDAALRALNAC CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDRTETPQLRITDAEVAQAAQRLSPAIKQAMAAAVANIDTFHRAQQLPEVDVETQPGVRC HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH HQLTRPVAAVGLYIPGGSAPLLSTVLMLATPARIAGCRRVILCSPPPIADEILYAASLCG HHHHCCHHHEEEEECCCCCHHHHHHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHHC VQDIYQVGGAQAIAAMAFGTETIAKVDKIFGPGNAWVTEAKRQVSQCLDGAAIDMPAGPS HHHHHHHCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCCCCCC EVLIIADAQANPAFVAADLLSQAEHGPDSQVILLTPDANLAQRVARETERQLQSLSRAAI CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH AHQALAGSRLIIAADLAECVAISNRYGPEHLIIQTRDAGRWVEDITSAGSIFLGDWSPES HHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCCCC AGDYASGTNQVLPTYGYTTTCSSLGLADFQKRMTVQELTPAGLLALAPTVETLAQAERLT CCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AHKNAITLRVAALKEPQ HHCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA