| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624884
Identifier: 84624884
GI number: 84624884
Start: 3664973
End: 3665434
Strand: Reverse
Name: 84624884
Synonym: XOO_3227
Alternate gene names: NA
Gene position: 3665434-3664973 (Counterclockwise)
Preceding gene: 84624886
Following gene: 84624883
Centisome position: 74.2
GC content: 71.65
Gene sequence:
>462_bases ATGTGCACGTCGTTCCGCCCCGCAGTGTGGGCAATCGCTCTGATCTGCAGTCCTGCCTTGGGCGCCGCGTCCCGGCCTGC CGCTGCGCCTGCGCGCGCTCCGGTCGCGCTGCCTGCGTCGTCCGAGCAAGGCGGCGACGCGAGCGTGCCATTGCCGGCCA CGCTGAAATCCGGCATGGGATATCGCGCGTTCGCGCAGGCGGTGATGGAGCAGGGCTGGCAACTGGTGGATCCGCTTGCG GCCGATAGCTGCATGGCCGCTGGCGACTGCGAGATCGAGTTCCTTGCGCCCGGCGGCAGTGCGCGCCTGCGCGTGCAGGT GGGCTCGCAGGCCGGTGCGGCGGTGGTGCAAAGCTGGCGTGCGCGACAGGTGCCGCTGGATCGCATCGGCAACACGAGCG CTGCGGCGGGAGACGCCAGGCCTGCACCGGCGGCAGTGGACGCAGGCAACGGCTCGCGCTGA
Upstream 100 bases:
>100_bases AATGCATCCCAAATGCAATTGCCGCAGCGCATCACAGGCATGTCAGACTAGCGCATCTTCCTCTTCCCAGTTCCCTGCCA GGACCGCCAGGACCGTTTGA
Downstream 100 bases:
>100_bases TTCCCCCGGCCGCAGGCCGATCGCGCATGCGGCGTATCATGGCGCGGCAGGGGCGGATTGTTTCGATCGCGCGCCTGGTT TGATGCGCCTTTCCCGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMGYRAFAQAVMEQGWQLVDPLA ADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWRARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR
Sequences:
>Translated_153_residues MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMGYRAFAQAVMEQGWQLVDPLA ADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWRARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR >Mature_153_residues MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMGYRAFAQAVMEQGWQLVDPLA ADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWRARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15327; Mature: 15327
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCCCC YRAFAQAVMEQGWQLVDPLAADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWR HHHHHHHHHHCCCEECCCHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHH ARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR CCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCCCC YRAFAQAVMEQGWQLVDPLAADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWR HHHHHHHHHHCCCEECCCHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHH ARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR CCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA