Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84623106

Identifier: 84623106

GI number: 84623106

Start: 1578289

End: 1579125

Strand: Direct

Name: 84623106

Synonym: XOO_1449

Alternate gene names: NA

Gene position: 1578289-1579125 (Clockwise)

Preceding gene: 84623105

Following gene: 84623107

Centisome position: 31.95

GC content: 66.43

Gene sequence:

>837_bases
ATGAATGCAACGTCCTTCAATCGCCTGCGTGGCACCCGTGCCGTTCGCACCAGCGTCCTCGCCTGCATGACCGCCATTCC
GTGCATCGCGCATGCACAAACCGATCTGACCGGGAGCTCGCGCCTGCTGGGAGACCGGACTGAAATCACTGCGGGCGCCG
CAGCAGTGGCCACGCCAGACTATGCCGGTGCCGAGCGCGCACGCGTGCAATTCAATCCGGTATTGGTGGTGCAACGTGGC
GTGCTGTTCTTCGACACGGCGCGCGGCGCCGGCCTGCAATTCCAGAGCAACTCTGGCTTCTACATCTCGCAATCGCTGTA
TTACGACCTGGGCCGGCTGCAAAGCGACAGCAACTGGCGGCCGGGCTCGCGCCTGCTGGCGGGCATGGGCGATGTGCCTG
GGTCGGTGACCGCACGCACGCTGGTGATGCAGCAGGTGACGCCCTACGTGAACGTCAATGCAGAGGCGGAATGCGCACTC
AGGGATGCAGCGCGCCGCAACCGCTATCGCGCCGGTGTGGAGTTCACCCTGCTGCATCGCGCCAGCGACACGGTGACCCT
GGATCTGGATGTGCATGGCGGCGACCACCGCTTCAATCAGGCCTCTTTCGGCGTCACCGACGCGCAAGCGGAGCGGACGC
GTTTTGCGGCGTTCAACGCCGGATCCGGCGTCTACGCCGCCGCGGTCGGTGGCAGTTGGACGCATTCGGTGGGCGACCAC
TGGGCCACCACGCTGGGGGTCACCGGCACGCGCTACCTGGACAACGCCGAAGACAGCCCGCTGGTGGCACGCCGCGCGGT
GGTCGGCGGCACCTTTGCACTGACCTACAGCCGCTGA

Upstream 100 bases:

>100_bases
GACACCGCACGTCAGCGCGTGCTGAGCCGTATTGCGCTGTTTCAGGCGTTCTACGGCGTGCGCCTGCCCACCGCTTCCTG
ACTTCCGCCGGAGACTTCCG

Downstream 100 bases:

>100_bases
GCGGCACAGACCGGGGGATCGAAGGATGACGATGTTTTATCGCGGCCTGGTGTGCGGCACGTTGCTGCTGGCACTAGCCG
CCTGCAGCGGGCCGGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: MipA Family Protein; MltA-Interacting MipA; Outer Membrane Protein; Conserved Protein; MipA Family MltA-Interacting Protein; Outer Membrane Protein Yiat

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPDYAGAERARVQFNPVLVVQRG
VLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWRPGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECAL
RDAARRNRYRAGVEFTLLHRASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH
WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR

Sequences:

>Translated_278_residues
MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPDYAGAERARVQFNPVLVVQRG
VLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWRPGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECAL
RDAARRNRYRAGVEFTLLHRASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH
WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR
>Mature_278_residues
MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPDYAGAERARVQFNPVLVVQRG
VLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWRPGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECAL
RDAARRNRYRAGVEFTLLHRASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH
WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29804; Mature: 29804

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
YAGAERARVQFNPVLVVQRGVLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWR
CCCCCCCEEEECEEEEEECCEEEEECCCCCCEEEECCCCEEEEHHHHHHHHHCCCCCCCC
PGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECALRDAARRNRYRAGVEFTLLHR
CHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEE
ASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEEECCCCCCCCCCCH
WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR
HHHHCCCCCCEECCCCCCCCHHHHHHEECCEEEEEECC
>Mature Secondary Structure
MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
YAGAERARVQFNPVLVVQRGVLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWR
CCCCCCCEEEECEEEEEECCEEEEECCCCCCEEEECCCCEEEEHHHHHHHHHCCCCCCCC
PGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECALRDAARRNRYRAGVEFTLLHR
CHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEE
ASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEEECCCCCCCCCCCH
WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR
HHHHCCCCCCEECCCCCCCCHHHHHHEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA