| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is hipO [H]
Identifier: 83593148
GI number: 83593148
Start: 2108933
End: 2110099
Strand: Direct
Name: hipO [H]
Synonym: Rru_A1813
Alternate gene names: 83593148
Gene position: 2108933-2110099 (Clockwise)
Preceding gene: 83593142
Following gene: 83593150
Centisome position: 48.45
GC content: 67.35
Gene sequence:
>1167_bases ATGAGCCTTCTCGATGCCTTCAAGCCCCTGCACGCCGGGATGATCGATTGGCGCCACGACATCCACCGCCACCCCGAGCT GGGCTATCAGGAAACCCGGACGGCGGCCAAGGTGGCGGGCCTGCTCCGCGGTTTCGGCTGTGACGCGGTGGTCGAACAGA TCGGCGGCACCGGCGTTGTCGGCGTGCTGCGCCAGGGCGACGGGCCGATGATCGGATTGCGTGCCGATATGGACGCCTTG CCGATTCCCGAGAGGAATGATTTCGATCACCAAAGCGTTCACCCCGGGGTCATGCACGCCTGCGGTCACGACGGTCATAC GGCGATGCTGTTGGGCGCGGCCCGTCATCTGGCGGCGACGCGGCGTTTCCAGGGCTCGGTGGTGTTCATTTTCCAACCGG CCGAGGAAGGTCTGGCCGGGGCGCGGGCGATGATCGAGGACGGCCTGTTCGAGCGTTGGCCGGTCGAGGCGGTCTATGGC CTTCATAACCTGCCCGGCTTGCCGGCGGGCAGCATCTCGGTCTCCCCCGGCCCGCAACTGGCCGCCGCCGACAAGCTGGT CATCGAGATCACCGGCCGGGGCGCCCATGCCGCCGCCCCCGAACTGGCGCGCGACCCGGTTCTGGCCGGCGCCGCCGCCG TTCAGGCCCTGCAGCAGATCGTCTCGCGCAATGTCTCGCCGGCGGAAACGGCGGTGGTTTCCGTCACCTGCTTCAATGCC GGGGAAACCTTTAATGTTCTGCCCGACGGCGCGACGCTGAAAGGCACCGTGCGCTACTTCTCGTCGGAAACCGGCGATTT GGTGCGCAACCGCATCGCCCAGGTCCTCGAGGGCATCGCGCTGGCCCATGACGTATCGATCACCCTTGATCTCCAGCGCG GCTATCCGGCCACGGTCAACAGCGCCCCCCAGGCCGATTTCGCCCGGGGCGTCGCCCGCGCCCTGCTTGGCGAGGATCTG GCCCCGCCCCAGGAGCCGCGGATGATCGCCGAGGATTTCTCGCTGATGCTCCAGGTCAAGCCCGGCGCCTTCGGCTTTAT CGGCAATGGCCAAAGCCCCTCGCTCCACAATCCGCGCTATGAGTTCAACGACGCCATCTTGCCCATTGGCGCCGCCTATT TCTGCGCCCTGGCCGAAACCGCCCTGCGGCGGCCCCCTCACGGATAA
Upstream 100 bases:
>100_bases GAAATGCGAGGATAACGAGACAGAGCGACGACGGCGCCCCAAATCAATACCACGGCCGACCAAGCCCCTTGCTTTCCTTT TACAGAACGGACCCTTGCCC
Downstream 100 bases:
>100_bases GGGGGCCACGGATAAGGGGGATCACCAAGGTCATCCCTGGCCCTGAAGCGCCACGACGACCAGCAGCACGGCGGCGGCGA TCGCCGCCCAAATCAGGAAA
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSLLDAFKPLHAGMIDWRHDIHRHPELGYQETRTAAKVAGLLRGFGCDAVVEQIGGTGVVGVLRQGDGPMIGLRADMDAL PIPERNDFDHQSVHPGVMHACGHDGHTAMLLGAARHLAATRRFQGSVVFIFQPAEEGLAGARAMIEDGLFERWPVEAVYG LHNLPGLPAGSISVSPGPQLAAADKLVIEITGRGAHAAAPELARDPVLAGAAAVQALQQIVSRNVSPAETAVVSVTCFNA GETFNVLPDGATLKGTVRYFSSETGDLVRNRIAQVLEGIALAHDVSITLDLQRGYPATVNSAPQADFARGVARALLGEDL APPQEPRMIAEDFSLMLQVKPGAFGFIGNGQSPSLHNPRYEFNDAILPIGAAYFCALAETALRRPPHG
Sequences:
>Translated_388_residues MSLLDAFKPLHAGMIDWRHDIHRHPELGYQETRTAAKVAGLLRGFGCDAVVEQIGGTGVVGVLRQGDGPMIGLRADMDAL PIPERNDFDHQSVHPGVMHACGHDGHTAMLLGAARHLAATRRFQGSVVFIFQPAEEGLAGARAMIEDGLFERWPVEAVYG LHNLPGLPAGSISVSPGPQLAAADKLVIEITGRGAHAAAPELARDPVLAGAAAVQALQQIVSRNVSPAETAVVSVTCFNA GETFNVLPDGATLKGTVRYFSSETGDLVRNRIAQVLEGIALAHDVSITLDLQRGYPATVNSAPQADFARGVARALLGEDL APPQEPRMIAEDFSLMLQVKPGAFGFIGNGQSPSLHNPRYEFNDAILPIGAAYFCALAETALRRPPHG >Mature_387_residues SLLDAFKPLHAGMIDWRHDIHRHPELGYQETRTAAKVAGLLRGFGCDAVVEQIGGTGVVGVLRQGDGPMIGLRADMDALP IPERNDFDHQSVHPGVMHACGHDGHTAMLLGAARHLAATRRFQGSVVFIFQPAEEGLAGARAMIEDGLFERWPVEAVYGL HNLPGLPAGSISVSPGPQLAAADKLVIEITGRGAHAAAPELARDPVLAGAAAVQALQQIVSRNVSPAETAVVSVTCFNAG ETFNVLPDGATLKGTVRYFSSETGDLVRNRIAQVLEGIALAHDVSITLDLQRGYPATVNSAPQADFARGVARALLGEDLA PPQEPRMIAEDFSLMLQVKPGAFGFIGNGQSPSLHNPRYEFNDAILPIGAAYFCALAETALRRPPHG
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=440, Percent_Identity=30.9090909090909, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41103; Mature: 40972
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLDAFKPLHAGMIDWRHDIHRHPELGYQETRTAAKVAGLLRGFGCDAVVEQIGGTGVV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEE GVLRQGDGPMIGLRADMDALPIPERNDFDHQSVHPGVMHACGHDGHTAMLLGAARHLAAT EEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH RRFQGSVVFIFQPAEEGLAGARAMIEDGLFERWPVEAVYGLHNLPGLPAGSISVSPGPQL HHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCC AAADKLVIEITGRGAHAAAPELARDPVLAGAAAVQALQQIVSRNVSPAETAVVSVTCFNA CCCCEEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC GETFNVLPDGATLKGTVRYFSSETGDLVRNRIAQVLEGIALAHDVSITLDLQRGYPATVN CCEEEECCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC SAPQADFARGVARALLGEDLAPPQEPRMIAEDFSLMLQVKPGAFGFIGNGQSPSLHNPRY CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCEEECCCCCCCCCCCCCC EFNDAILPIGAAYFCALAETALRRPPHG CCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLLDAFKPLHAGMIDWRHDIHRHPELGYQETRTAAKVAGLLRGFGCDAVVEQIGGTGVV CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEE GVLRQGDGPMIGLRADMDALPIPERNDFDHQSVHPGVMHACGHDGHTAMLLGAARHLAAT EEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH RRFQGSVVFIFQPAEEGLAGARAMIEDGLFERWPVEAVYGLHNLPGLPAGSISVSPGPQL HHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCC AAADKLVIEITGRGAHAAAPELARDPVLAGAAAVQALQQIVSRNVSPAETAVVSVTCFNA CCCCEEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC GETFNVLPDGATLKGTVRYFSSETGDLVRNRIAQVLEGIALAHDVSITLDLQRGYPATVN CCEEEECCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC SAPQADFARGVARALLGEDLAPPQEPRMIAEDFSLMLQVKPGAFGFIGNGQSPSLHNPRY CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCEEECCCCCCCCCCCCCC EFNDAILPIGAAYFCALAETALRRPPHG CCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]