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The map label for this gene is ytxE [H]

Identifier: 83593142

GI number: 83593142

Start: 2104864

End: 2105553

Strand: Direct

Name: ytxE [H]

Synonym: Rru_A1807

Alternate gene names: 83593142

Gene position: 2104864-2105553 (Clockwise)

Preceding gene: 83593141

Following gene: 83593148

Centisome position: 48.36

GC content: 62.9

Gene sequence:

>690_bases
ATGATGGGTCAAAGCGGCGGCGGTCGCCACCATGACGCCCCGGAGCACGACGATACCGACGCCTGGCTGATCAGCTTCGC
CGATATGTCGTGCCTGCTGCTTGGCTTCTTCGCCATGCTCGCCTCGATTTCCAGCGTCGATCTGGTTCAATACGAAAAGG
TCAAGGCCGGCATCCAGGAAAGCATCGGCAGCCGCGAGGTGACCAAGCCGATCGAGGAGTTGCGCCAGCAAACCGGCGAC
GTCATCAAAAGCCTGCAGGTCGAAGACGTGGTCGGGCTTGGCCAGGACCAGCAGGGGCTGGTCATCGAATTCGCCTCCAG
CGCCTTTTACGAACCGGGCTCGGCCGATATCCGCCCCACCGCCATCCCGGTGCTTGAACAGGTGATCGCCACCTTGAACG
AGCCGCGCTATCAGGGGTTCCAGATCGAGATTCAGGGCCACACCGACGATATCCCGATCAACACCGCCCAATATCCATCG
AATTGGGAGCTGTCGGGGGCGCGGGCGACCCGCGTGCTGCGCTTCATGCTTGACCAGGGGGTGGCCAAGGAACGGGTTCT
GGCCATCGCCTATGCCGATGTGGCGCCCAAGGTGCCCAATCGCACCCCGGAGGGGCAGGCGATCCCGCTTAATCAGGAAC
TCAACCGCCGCATCGCCGTCCGCGTCTTCCCGCGGGCCATCCCCAAATAA

Upstream 100 bases:

>100_bases
GCGCAAAAGCCCGCGCTACATCCAAGACCGGATGAACAGCTACCTTGATCCGTCGATCCACTTCAGCATCGATCGGGTCC
GCATCAAGGAGTAAGCGAAG

Downstream 100 bases:

>100_bases
GGACGGCCCGCGAGGCCCGGGGTATCAGGCCCGCCCGCCGCGCTTGGCCAGCACCTCGGCCAAGCCCATCGCCCCCAGCG
CCACCACGACATGGGCGGTT

Product: OmpA/MotB

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MMGQSGGGRHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQESIGSREVTKPIEELRQQTGD
VIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPS
NWELSGARATRVLRFMLDQGVAKERVLAIAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAIPK

Sequences:

>Translated_229_residues
MMGQSGGGRHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQESIGSREVTKPIEELRQQTGD
VIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPS
NWELSGARATRVLRFMLDQGVAKERVLAIAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAIPK
>Mature_229_residues
MMGQSGGGRHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQESIGSREVTKPIEELRQQTGD
VIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPS
NWELSGARATRVLRFMLDQGVAKERVLAIAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAIPK

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 25196; Mature: 25196

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGQSGGGRHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQE
CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SIGSREVTKPIEELRQQTGDVIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHCCCCCCCCCCCH
AIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPSNWELSGARATRVLRFMLDQG
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
VAKERVLAIAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAIPK
CCHHHEEEEEECCCCCCCCCCCCCCCEECCCHHHCCEEEEEECCCCCCC
>Mature Secondary Structure
MMGQSGGGRHHDAPEHDDTDAWLISFADMSCLLLGFFAMLASISSVDLVQYEKVKAGIQE
CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SIGSREVTKPIEELRQQTGDVIKSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHCCCCCCCCCCCH
AIPVLEQVIATLNEPRYQGFQIEIQGHTDDIPINTAQYPSNWELSGARATRVLRFMLDQG
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
VAKERVLAIAYADVAPKVPNRTPEGQAIPLNQELNRRIAVRVFPRAIPK
CCHHHEEEEEECCCCCCCCCCCCCCCEECCCHHHCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]