Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312677

Identifier: 83312677

GI number: 83312677

Start: 3930690

End: 3931388

Strand: Reverse

Name: 83312677

Synonym: amb3578

Alternate gene names: NA

Gene position: 3931388-3930690 (Counterclockwise)

Preceding gene: 83312679

Following gene: 83312676

Centisome position: 79.15

GC content: 66.24

Gene sequence:

>699_bases
ATGACGCAGGCGCTGGACCGCGAGGTGCTGCTGCAATTGCAATTCGCGCCGCTGTTTACCGGGCTGGCGGAGAGGGATGT
CCGCCAATTGCTCGAGGGCGCCGAACTGCTGGTCCTGGGCCACGAGCACCTTCTCTACCGCGAGGGAGAGGCGGTGGATC
GCTTCTACGTGGTTCTGGACGGCCACGTGGAGCTGTCGCTGGACGTGGACGGCAAGAAGAGCGTGGTCGAAGTGGCGCGG
CGCTCCACCGTGCTGGGCGACGCCGCCATGTTCGGGCCCGGGCGTTACATCATGACCGCCCGCGTGTTGACCGGCGCCAC
CCTGCTGTCCATTCCGGCCCAGTCCTTCCGCGCCCGCCTGGAAGAGCGCCTGGACATCACGCTGCACATGCTGACCACCA
TGAGCTTCCGCCTGCGCATGCTGGTCCGCCAGATCGCCGAGCTGAAGCTGAAGACCACGGCCCAGCGCCTGGGCTCCTTC
CTGCTGACCATGACCGAGGCCGAGGAAGGCCGTGCCGAGCTGCGCTTTCCCTATGACAAGAAGCTGGTGGCCGACCAGTT
GGGCATGAAGCCGGAAAGCCTGTCGCGGGCGCTCGGCAAGCTGGGGCGGCTGGGCGTCGAATCCCTGCCCGACAATCTGG
TGGTCATCGCCGAGGTGGCCACCTTGCGCGAATTCTGCGCCGAAGAAGAGGTGGGATAA

Upstream 100 bases:

>100_bases
ATCCGACCTCCGGCAAGGGGCGGCATTTAGGGGCTGGAACAGGCCCGCGCTTCGTCGTACGGTGCCTGCCGGTTGACCGG
AGTCACATAAGGAACCGCTT

Downstream 100 bases:

>100_bases
GGCCCATGGCACTCAACGCCGCCGAACTGGAACTCGTGGCCCAGGCTCCGCTGCTGGCGGGGCTGTCCTCGGCCGACCTC
GCCCTGTTGATGGATGGCGC

Product: cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Activator FtrB; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulator Of Biofilm Formation Fnr Family; Transcription Regulator Protein Crp/Fnr Family; Transcriptional Regulator Dnr; Cyclic AMP Receptor Protein; CRP/FNR-Like Transcriptional Regulator; Transcriptional Regulator DnrS; CRP Family Transcriptional Regulator; Transcriptional Regulator Dnr Type; Transcriptional Activator; DnrE Protein; Regulatory Protein; Fnr-Like Transcriptional Activator; DNR Protein; Transcription Regulator Protein; Fnr-Like Regulatory Protein; FNR-Like Transcriptional Regulator; Transcription Regulator; CAMP-Bindin Transcriptional Regulator; Transcriptional Regulator Protein Fnr/CRP Family

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLDGHVELSLDVDGKKSVVEVAR
RSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARLEERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSF
LLTMTEAEEGRAELRFPYDKKLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG

Sequences:

>Translated_232_residues
MTQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLDGHVELSLDVDGKKSVVEVAR
RSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARLEERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSF
LLTMTEAEEGRAELRFPYDKKLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG
>Mature_231_residues
TQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLDGHVELSLDVDGKKSVVEVARR
STVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARLEERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSFL
LTMTEAEEGRAELRFPYDKKLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25897; Mature: 25765

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHEEECCCCCEEEEEEEE
GHVELSLDVDGKKSVVEVARRSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARL
CCEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHH
EERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSFLLTMTEAEEGRAELRFPYDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHH
KLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG
HHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHEEECCCCCEEEEEEEE
GHVELSLDVDGKKSVVEVARRSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARL
CCEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHH
EERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSFLLTMTEAEEGRAELRFPYDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHH
KLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG
HHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA