Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312032

Identifier: 83312032

GI number: 83312032

Start: 3130883

End: 3133327

Strand: Reverse

Name: 83312032

Synonym: amb2933

Alternate gene names: NA

Gene position: 3133327-3130883 (Counterclockwise)

Preceding gene: 83312033

Following gene: 83312031

Centisome position: 63.08

GC content: 67.32

Gene sequence:

>2445_bases
ATGAAAGCCCTGCTGACCGCCATGGAGCGGTGGACTCTGGGCCGAAAGCTGGTGTTGGGCTCTCTGATCACCATGGTCAT
CGTCATCGGTGTGGGTGTGTTTGGGGTCTCGAGCCAGCTTCGCCTCAGCCGGAGCATGGAATTGCTGGCTGGCGCGGGGG
TGCGGGTGGCTTTGAGCATCAAGGGCCTCCAGGCGGATTACGCCGTGATCGGCCGTGCGCTTCGCCAGGCCATCCTGGCA
GCCGACGCGCCCGCCCGCCAGGAGGCCCTTCGCCAGCTCGAGGACGCCCGCAAGCGGATCCGCAAGACCGGCGCGGAAAT
CCGCCCCAGGTTGCTGAAGAAAGAAAACGGTGAACTGATCGACCGCTTCGAGCGGCTTTATGTCGCCTATGGCGTGCTGG
TGGACCGGGCGCTGTCTCGCCTGGAGCAGGGGCGGGAGGACGAGGCCCGGGCCCTGGTAGGCTCAGCCGAGTTCCAGCAT
GCCGGTGCCGCCGTCGAGCAGTTGCTGGTCCAAGGGGCAGAGATCAGTGATGCCAACCTCGATGCGGCGGCGCACGATGC
CGTGGCTTCGGCCATGGCCAGCCTCTGGCTGTTCGCGGCGTTGCTGGTGTGTGGTGTGGCGGTCGCCCTGGGCGCCAGCC
GTCTGATCGGGCGCTCCATCCGCCTGCCGCTGTTCCGGCTCCGGGATTCCGTCGCGGAGATGGCGCAGGGCAATTTGGAT
CGGTCGCTGCCCTTTGCCGATTATCCCAACGAATTTGGGGAGTTGTCCCGGGCCATCGGCGTGCTGCAGGCGGAAGCCCG
GCGCATGGGAGCGCAACGTTGGATCAAGACCAATCAGGCCGCCATTCAGGCCGAACTGCAGACGGCGGAATCCCTTCCCG
TCCTGGCCCGCAACTTCCTGGCCGCCATCGCGCCGCTGCTGAATGTGGGACGTGGCGTGTTCTATGTCTGGGAGGAGGAG
GAGCGCCATCTGCGTCTGCTGGGCAGCTATGCCCATCTCGAGCGCAAATCGGTCCACCAGACCTTCCGGCTGGGCCAGGG
GGTGGTGGGGCAATGCGCCTTGGAACGTCAGCCCATCGTCATCACCGACCCGCCCGAGGATTATGTCCATATCGGCTCCG
CTCTGGGCGAAGCGCCGCCGCGTGTCATCGCGGCTCTGCCGGTGCTGCATAACGCGAGACTCATGGCCGTGGTGGAACTG
GCGGCCTTCGATCGCTTCGGTCCCGATCAGGAGGCTCTGCTGGAAGGAATTCTGCCCGCCCTGGCCATGACCATGGAAAT
CCTCGGCCGGACGGTCAAGACCCGGGACCTGCTGGACGAGACCCGGCGTCAGGCCGAAAGCATGGAAAAGCAGGCCGCCC
GCCTGGAGGAACAGGCCGTCGAACTGGAGGCGCAGCAGACCGAGATCCGTGCCACCGAGGCCTGGTATCGCGGCATTATC
GAGGCGGCGCCCGACGGCATGCTGGTGATCGATGATCGTGGAATGATCATCCTGATCAATCCCCAAGCTGAAGCCATGTT
CGGCCATGGGAGCGGCGAATTGACCGGGCGGCCCGTCGAGCCCCTGATTCCCGCCCTGATGCGGCAGGACTATGGGACAC
GGCAGGGGCACCGGCTACAGGGCGTCCGGAGGGACGACACCGTCTTTCCGCTAGTGGCTGGCCTGTCCCGCTTGCCCACC
ATCGGTGGCCACGGCGGGTGCATCTGCGTATCCCTTCGCGAGATTGTCGTGGGGGAGGTGCCGGCCCCTGAGCCGTGGCC
GGGGGCTGCCCCCCCTCTGCCCGAGCCCATCGCACCCGCGCCAGAGCCGGCCCCTGAGACCAAGCCGGCCCCTGAAGCCA
TGCCGGCGGCTCGGTCTGCCGATGCCCTTCCCGATCTGCCCGGCATCGATGTGAAGGCGGGCTTGGCGACCATGGCCAAC
AAGCTGTCGCTCTACACCCGGATGCTGATCAAGTTCCGGGAGGGGCAGGGGCGATTCGCCGAGCTTTTCGCCGCCGCCCA
GGCTGATTCCGATCCGTCCGCCGCCACCCGGGCCGCCCATACGCTGAAGGGCACCGCCGGGAATATCGGCGCCAAGGGCC
TGCAAGCCGCGGCGGCCGCGTTGGAACATGCCTGCAAGGAGGGAGGCCCGCAGGACGAGATCGAGGTCCTGCTGTCCAAC
ACCCTGGCCGAACTGGAGCCGGTCATGGCGGGCCTGCGCCGCCTGGAGGGGGCGGAGCCGTCCACGGCCCCCGCCATCTC
CGACGCCGAGGTGTGGGTGGCCCTGGGCAAGCTGGCGGCATTGCTGGAAGACAGCGATTCCGAGGCGGGCGACCTGCTGG
AAGGGCTGCTGCCCAAGCTGGCGGGCACCGCGCTGGCCACCGCCTTGCAACCGGTGGCCAAGGCCATTGACGATTGCGAC
CTGGACGAAGCCCTGGTGCAGCTCGGGAAGGTCAAGGTCCCATGA

Upstream 100 bases:

>100_bases
TGTATTTCCTATCGGGCTTCGCCGACCCCAATGGCTTGCCCGGTGGTCTTGTCGGGGCGTTCGTCGACCTCAGCGCCATC
AGTCGGTCAGGAGGGGCTCC

Downstream 100 bases:

>100_bases
CGGCGCCGCTTTACGTGGCGGGAATCGGCGCATCGGCCGGCGGGTTGGAGGCCATGCTGCTGATGTTCGCCCGGCTGCGC
CCCACCGGGCGCATCGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Two-Component System Sensor Kinase; Sensor Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Signal Transduction Histidine Kinase; Two-Component System Sensory Histidine Kinase; Sensor Histidine Kinase; Histidine Kinase; Histidine Kinase Hamp Region Domain Protein; Pas Sensor Protein; Gaf Domain Protein; Sensory Histidine Kinase; Hybrid Signal Transduction Histidine Kinase J; Response Regulator Receiver Domain Protein; Pas/Pac Sensor Protein; Sensor Histidine Kinase/Response Regulator Fusion Protein; Sensor Histidine Kinase/Respose Regulator; Complex Regulator Protein; Sensor Kinase; Sensory Box Histidine Kinase/Response Regulator; Hybrid Sensory Kinase; Methyl-Accepting Chemotaxis Protein; Two-Component System Sensory/Regulatory Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Sensor Protein BarA; Sensor Protein GacS; Integral Membrane Sensor Hybrid Histidine Kinase; Two Component System Histidine Kinase; Two-Component Sensor Histidine Kinase/Response Regulator; PAS Fold Family Protein; Histidine Protein Kinase; Histidine Kinase/Response Regulator Hybrid Protein; Histidine Kinase Hybrid

Number of amino acids: Translated: 814; Mature: 814

Protein sequence:

>814_residues
MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSIKGLQADYAVIGRALRQAILA
ADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELIDRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQH
AGAAVEQLLVQGAEISDANLDAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD
RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFLAAIAPLLNVGRGVFYVWEEE
ERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIVITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVEL
AAFDRFGPDQEALLEGILPALAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII
EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQGVRRDDTVFPLVAGLSRLPT
IGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPAPEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMAN
KLSLYTRMLIKFREGQGRFAELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN
TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKLAGTALATALQPVAKAIDDCD
LDEALVQLGKVKVP

Sequences:

>Translated_814_residues
MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSIKGLQADYAVIGRALRQAILA
ADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELIDRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQH
AGAAVEQLLVQGAEISDANLDAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD
RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFLAAIAPLLNVGRGVFYVWEEE
ERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIVITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVEL
AAFDRFGPDQEALLEGILPALAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII
EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQGVRRDDTVFPLVAGLSRLPT
IGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPAPEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMAN
KLSLYTRMLIKFREGQGRFAELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN
TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKLAGTALATALQPVAKAIDDCD
LDEALVQLGKVKVP
>Mature_814_residues
MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSIKGLQADYAVIGRALRQAILA
ADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELIDRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQH
AGAAVEQLLVQGAEISDANLDAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD
RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFLAAIAPLLNVGRGVFYVWEEE
ERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIVITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVEL
AAFDRFGPDQEALLEGILPALAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII
EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQGVRRDDTVFPLVAGLSRLPT
IGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPAPEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMAN
KLSLYTRMLIKFREGQGRFAELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN
TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKLAGTALATALQPVAKAIDDCD
LDEALVQLGKVKVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87114; Mature: 87114

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50885 HAMP ; PS50894 HPT ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE
KGLQADYAVIGRALRQAILAADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELI
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH
DRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQHAGAAVEQLLVQGAEISDANL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCC
RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AAIAPLLNVGRGVFYVWEEEERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIV
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEE
ITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVELAAFDRFGPDQEALLEGILPA
EECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQ
HCCCCCEEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHC
GVRRDDTVFPLVAGLSRLPTIGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPA
CCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMANKLSLYTRMLIKFREGQGRFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AGTALATALQPVAKAIDDCDLDEALVQLGKVKVP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE
KGLQADYAVIGRALRQAILAADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELI
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH
DRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQHAGAAVEQLLVQGAEISDANL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCC
RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AAIAPLLNVGRGVFYVWEEEERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIV
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEE
ITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVELAAFDRFGPDQEALLEGILPA
EECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQ
HCCCCCEEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHC
GVRRDDTVFPLVAGLSRLPTIGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPA
CCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMANKLSLYTRMLIKFREGQGRFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AGTALATALQPVAKAIDDCDLDEALVQLGKVKVP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA