| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is zraS [H]
Identifier: 78358504
GI number: 78358504
Start: 3425558
End: 3427027
Strand: Direct
Name: zraS [H]
Synonym: Dde_3465
Alternate gene names: 78358504
Gene position: 3425558-3427027 (Clockwise)
Preceding gene: 78358503
Following gene: 78358509
Centisome position: 91.83
GC content: 59.8
Gene sequence:
>1470_bases ATGCAAACCGCACCGGCACAACAGGCCACGGTACTTACGGTGGAAGATGACCCTGTCATCCGCGAAACCATAGCAGCCTG GCTGGAGGATTCCGGCCTGACCGTGCTGCAGGCCGAAGACGGCAGCAAAGGTCTGGACGTTTTCCGCAGGCACACACCAG ACCTTGTACTGCTGGATCTCGGCATTCCCGGCATGAGCGGTGAAAGCCTGCTCAAGCTCATGGTGCAGGAACAGCCCGAC ACGCCGGTCATCATCGTTTCCGGCACGGCGGAAATAGACGCCGCCATCAGCGCCTTCAAGAACGGCGCATGGGATTTCAT CACCAAACCCGTGCCCAATATGGAACTGCTGGAAAAAACCGTGCGGAACTGTCTGGAACGCAAATCACTGCGCGAACGGC TGGACGCCGCAGAGACCCGCTATTTCCAGTTCATCCAGCATCTGCCCGTGACGGTGTTTTCCATGGACGGCAGCATGCAG GTCACATGGCTCAATGCCGCATGCCCCAGAGTGCTGGGCTGGCCCGTGGCAGAAGCGCTGGGGACGGAAAACTGGTTCAT GGATAACGTGCACCCGCCGGACAGGCCCGCACTGCAACAGGCACTGGAAGCCGCGCTGCAGCGCGGGAACGACATTTTCT GCGAATTTTCATTCCGCCACCGCCACGGCTACCTTATCCGCCTGCAGGCGCGCTCCACATCCGTATCTGCTCCGGACGCT GCGCGCGCGGGCAGAATCGAAGGCGTTCTGCTTGATATCACCGACCGCGATTTTCTGGATAAGGTGCTTGTGCAGCGCGA AAAACTGAACACGCTGGGAGCCATGGCCGATGAAGTGGCCCATGAATTCCGCAACCCGCTGTTTGCGCTGGGCGGTTTTG CACGCAGACTGCATACGCGCATGCCCGACATCATGGAGGCCGGCATCATTCTGGAAGAAGCAAAACGCATGGAAACCATG CTGGACAGGCTAAAAGAGTACACCAGCCCTGTGGACGTCTCGCCGGAACCCACCAATGTCAACACATCCGTCAATTTTGC GCTGGACAGGCTGGAACCTCAGATAGCCAGACGCCGGGCGGCCGTTTCCAGCAATCTGGAAGCCGGCATGCCGGAAATAC AGTCCGATCCCGACATTCTGCTGCAGGTGCTCATGAATCTGGTGACCAACCTGCTGGATGCCATGCCTGAAGGCGAAACG CTGCGGCTGATCACCTCACAAAGTGCCGGAACACAGGAAGTGACGCTCATGGCACCGGTGCAGGGCACGCCCATGGCCGA CCCCGAACAGCTGCTGCTGCCCTTTGACGTTTCCGGACCGCAAAGAAACCTTGCGGTAAGTTACCGGCTGGTAAAAACCA TCGGCGGGCTGCTGTCCGTCACCCGCAGCCACAACGTGCATACGCTTACTCTTTCGCTGCCCGCCGGACACGACAGCCGC GTACCCGGCACGGGTGCCGGTGCTTCCTGA
Upstream 100 bases:
>100_bases GCTCGCGCTCCGTCGTAAACTGGGCAACCTGCATCCGCAGGACTTTGCACCATGCACAGTTTACGGCATCAACAGCGCGG AACACGCGCGGGAATACGGC
Downstream 100 bases:
>100_bases CGTGCTGCCGCCGCATAAAAAAAACGCCGCAGGACCTGCCCCCGGCGTTCTGAGCGTTACGCACCCTTTCCGGTATGCGC CTATACCCCTGCACGGGGGT
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MQTAPAQQATVLTVEDDPVIRETIAAWLEDSGLTVLQAEDGSKGLDVFRRHTPDLVLLDLGIPGMSGESLLKLMVQEQPD TPVIIVSGTAEIDAAISAFKNGAWDFITKPVPNMELLEKTVRNCLERKSLRERLDAAETRYFQFIQHLPVTVFSMDGSMQ VTWLNAACPRVLGWPVAEALGTENWFMDNVHPPDRPALQQALEAALQRGNDIFCEFSFRHRHGYLIRLQARSTSVSAPDA ARAGRIEGVLLDITDRDFLDKVLVQREKLNTLGAMADEVAHEFRNPLFALGGFARRLHTRMPDIMEAGIILEEAKRMETM LDRLKEYTSPVDVSPEPTNVNTSVNFALDRLEPQIARRRAAVSSNLEAGMPEIQSDPDILLQVLMNLVTNLLDAMPEGET LRLITSQSAGTQEVTLMAPVQGTPMADPEQLLLPFDVSGPQRNLAVSYRLVKTIGGLLSVTRSHNVHTLTLSLPAGHDSR VPGTGAGAS
Sequences:
>Translated_489_residues MQTAPAQQATVLTVEDDPVIRETIAAWLEDSGLTVLQAEDGSKGLDVFRRHTPDLVLLDLGIPGMSGESLLKLMVQEQPD TPVIIVSGTAEIDAAISAFKNGAWDFITKPVPNMELLEKTVRNCLERKSLRERLDAAETRYFQFIQHLPVTVFSMDGSMQ VTWLNAACPRVLGWPVAEALGTENWFMDNVHPPDRPALQQALEAALQRGNDIFCEFSFRHRHGYLIRLQARSTSVSAPDA ARAGRIEGVLLDITDRDFLDKVLVQREKLNTLGAMADEVAHEFRNPLFALGGFARRLHTRMPDIMEAGIILEEAKRMETM LDRLKEYTSPVDVSPEPTNVNTSVNFALDRLEPQIARRRAAVSSNLEAGMPEIQSDPDILLQVLMNLVTNLLDAMPEGET LRLITSQSAGTQEVTLMAPVQGTPMADPEQLLLPFDVSGPQRNLAVSYRLVKTIGGLLSVTRSHNVHTLTLSLPAGHDSR VPGTGAGAS >Mature_489_residues MQTAPAQQATVLTVEDDPVIRETIAAWLEDSGLTVLQAEDGSKGLDVFRRHTPDLVLLDLGIPGMSGESLLKLMVQEQPD TPVIIVSGTAEIDAAISAFKNGAWDFITKPVPNMELLEKTVRNCLERKSLRERLDAAETRYFQFIQHLPVTVFSMDGSMQ VTWLNAACPRVLGWPVAEALGTENWFMDNVHPPDRPALQQALEAALQRGNDIFCEFSFRHRHGYLIRLQARSTSVSAPDA ARAGRIEGVLLDITDRDFLDKVLVQREKLNTLGAMADEVAHEFRNPLFALGGFARRLHTRMPDIMEAGIILEEAKRMETM LDRLKEYTSPVDVSPEPTNVNTSVNFALDRLEPQIARRRAAVSSNLEAGMPEIQSDPDILLQVLMNLVTNLLDAMPEGET LRLITSQSAGTQEVTLMAPVQGTPMADPEQLLLPFDVSGPQRNLAVSYRLVKTIGGLLSVTRSHNVHTLTLSLPAGHDSR VPGTGAGAS
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=28.2608695652174, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=35.9375, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1787487, Length=141, Percent_Identity=31.2056737588652, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788549, Length=334, Percent_Identity=24.5508982035928, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788550, Length=124, Percent_Identity=29.8387096774194, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788905, Length=121, Percent_Identity=34.7107438016529, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=33.0578512396694, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786911, Length=120, Percent_Identity=35.8333333333333, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790860, Length=121, Percent_Identity=32.2314049586777, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53776; Mature: 53776
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAPAQQATVLTVEDDPVIRETIAAWLEDSGLTVLQAEDGSKGLDVFRRHTPDLVLLDL CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEC GIPGMSGESLLKLMVQEQPDTPVIIVSGTAEIDAAISAFKNGAWDFITKPVPNMELLEKT CCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHH VRNCLERKSLRERLDAAETRYFQFIQHLPVTVFSMDGSMQVTWLNAACPRVLGWPVAEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCHHHCCHHHHHH GTENWFMDNVHPPDRPALQQALEAALQRGNDIFCEFSFRHRHGYLIRLQARSTSVSAPDA CCCCCEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCC ARAGRIEGVLLDITDRDFLDKVLVQREKLNTLGAMADEVAHEFRNPLFALGGFARRLHTR HHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC MPDIMEAGIILEEAKRMETMLDRLKEYTSPVDVSPEPTNVNTSVNFALDRLEPQIARRRA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHH AVSSNLEAGMPEIQSDPDILLQVLMNLVTNLLDAMPEGETLRLITSQSAGTQEVTLMAPV HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECC QGTPMADPEQLLLPFDVSGPQRNLAVSYRLVKTIGGLLSVTRSHNVHTLTLSLPAGHDSR CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC VPGTGAGAS CCCCCCCCC >Mature Secondary Structure MQTAPAQQATVLTVEDDPVIRETIAAWLEDSGLTVLQAEDGSKGLDVFRRHTPDLVLLDL CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEC GIPGMSGESLLKLMVQEQPDTPVIIVSGTAEIDAAISAFKNGAWDFITKPVPNMELLEKT CCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHH VRNCLERKSLRERLDAAETRYFQFIQHLPVTVFSMDGSMQVTWLNAACPRVLGWPVAEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCHHHCCHHHHHH GTENWFMDNVHPPDRPALQQALEAALQRGNDIFCEFSFRHRHGYLIRLQARSTSVSAPDA CCCCCEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCC ARAGRIEGVLLDITDRDFLDKVLVQREKLNTLGAMADEVAHEFRNPLFALGGFARRLHTR HHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC MPDIMEAGIILEEAKRMETMLDRLKEYTSPVDVSPEPTNVNTSVNFALDRLEPQIARRRA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHH AVSSNLEAGMPEIQSDPDILLQVLMNLVTNLLDAMPEGETLRLITSQSAGTQEVTLMAPV HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECC QGTPMADPEQLLLPFDVSGPQRNLAVSYRLVKTIGGLLSVTRSHNVHTLTLSLPAGHDSR CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC VPGTGAGAS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]