| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mutL [H]
Identifier: 78358503
GI number: 78358503
Start: 3423304
End: 3425382
Strand: Direct
Name: mutL [H]
Synonym: Dde_3464
Alternate gene names: 78358503
Gene position: 3423304-3425382 (Clockwise)
Preceding gene: 78358502
Following gene: 78358504
Centisome position: 91.77
GC content: 64.21
Gene sequence:
>2079_bases ATGACGCAAGATAACACTCCGCAGCGCAAACGCATACAGCTGCTGCCCGACGCCCTGCGCAACCAGATAGCCGCGGGCGA AGTGGTGGAACGCCCTTCCAGCGTGGTCAAGGAACTGGTGGAAAACAGTCTGGACGCCGGTGCACGCACGGTGGAAGTGG CCATTGAAGACGGCGGACGCAGCCTGATAACCGTACGCGACGACGGCGACGGCATAGACGCGGCCGAACTGGAACTGGCC GTGACCAGACACGCCACCAGCAAAGTCACCACGTTTGACGAACTGATGCGCATAGCCAGTTACGGCTTCCGCGGAGAGGC ACTGCCCAGCATAGCCTCGGTATCAGATTTCCGCATGACCTCAGCGCCTGCTCAGCGCACGGCGGCTGATACCGCACCGG AAGCCAGCTGCATCCATGTGCGGCACGGCAGCATCATTTCGCACGGGCCGGCAGCGCTGTCCAGAGGCACACTGGTGGAA GTGCGCGACCTGTTCATGAACGTTCCGGCACGGCTTAAATTTCTTAAAACCACAGCCACGGAAAGCAAACGCTGTCAGGA ACTGTTCTGCAGGCTGGCGCTGGCACGCCCCGACGCGGGGTTTTCACTTTCCAGCGGCGGGCGCGAGGTGTTCCGCTTTC CTGCCGGTCAGACGTGGCGCGAACGCCTTGCGGTGCTGTGGCCGCCCAGCATCACGGAATCAATGGTGGAAGTACCGCCT TTGTGCAGCCGCGCCCACGACGGTACAGTACCCGACGTGCAGGTACGCGGACTGTGCGGCGACCCCCGCCAGTCGCAGCC GCGGGCGGACAAGATGCTGTTTTACGTCAACGGCAGAGCGGTTACCGACAAATTGCTCATGCGTGCCGTGCGCGATGCCT ATTCCGGCAGAATGCTGGGGCGCGAGTATCCGCAGGTGCTGCTGTTCATCGAACTGGACCCCGAAATGGTCGATGTGAAC GTGCATCCCGCCAAAAGCGAAGTGCGCTTCCGCGAAGAACGGCATGTCTTCAGTGCCGTGCGCCGCGCGGTTGAAGCCGC CCTGCAGCAGCTGAGCGCCACAGGGACACCGGACAGTCCGGATACCGCGGGCGTTGCAGACATACCCGGACATGCAGCTT CCGGCGCAGCCGGTCTGCGTCTGACACCGGACAGCCCTGCCACCCCAAGGGCAGCCGCCCGTCCGCTGGGATTCTGGGGA GAGGCAGACGCAGCACCCATTGTACCCAGAGCGCCGCGTGACCATGAGGACGACGAGGTGACGCTGCGTCATATGCCGCA GCCGTCCTCTGCCGACGGCAGAACAGACCGCACGGAGCATACGGACAGTGCGGAAGCACCGGACGCGCACCTGCCTCACC GTGACGACGGGGTGCGCATTGACTTCATGGCAGGCGGCCCTTCGCGGGCGGCAGGACACACGGACGCCGCAGTTGCGGAA CAGCCGGACGCGGAATACGGCCATGCAGCCCCGCACAGCACCCCGCAGCCGGCCGGTGCCCCCGCGGACCCCGCACACGG GGGTGTCACCGTGGGCGAATACACCTATCTCGGCCAGATTGCGGACACGTATCTGGTTGTCAGGCGCAAAGGCAGCACCC TGCTGCTGCTCGACCAGCATGCCGTGCATGAGCGCGTGCTGTACGAACGCATCCGCCGCGATGCCACGCAGGGGCAGACG CAGCTGCTGGCCTTTCCTGCGGAAATGCCCCTGCATAACGCAGAAGCGGAACGTCTTGCCTCGGTGTGGGAAAAGCTGGC AGCCATGGGGTTTGCGCTGGAAACGCACGGGCCTTCGCTGCGCATCCGGGGCATACCGTCCACCCTGGACCAGCGCGGGG CCACGGAATTTCTGCGTGAAGTGCTGGCAGACAGAAAGGGCAGACTGCCCGATATGTGGGTGATGATGTCGTGCCGCTCC GCCATCAAGGCGGGGCAGCGGCTTACTCCTGACGAGGCTGCGGGCCTTATTGCCCAATGGCTTGAAGTGCCCGATAGAGA ATTCTGCCCCCACGGGCGGCCCGCGGTGCTGCGCTTCACCCCCGCCGATCTGGAAAAAATGTTCAAACGCACAGGGTGA
Upstream 100 bases:
>100_bases ATACGGGCGCACCGTGTCAGCCGCGTTACGCGCCGCACTTTACCCGCGCGCCCGTTTATGGCTAGATGGGCAGTGCACGA GACTATGAGGACACATATCC
Downstream 100 bases:
>100_bases GCCGGAGACGGCGCACCGGCAGGCCGGAACATTCCGGCCTTTTTTTGCGTCTTATTTTTCCGCAGGGTGGACGCAGCTCG CGCTCCGTCGTAAACTGGGC
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MTQDNTPQRKRIQLLPDALRNQIAAGEVVERPSSVVKELVENSLDAGARTVEVAIEDGGRSLITVRDDGDGIDAAELELA VTRHATSKVTTFDELMRIASYGFRGEALPSIASVSDFRMTSAPAQRTAADTAPEASCIHVRHGSIISHGPAALSRGTLVE VRDLFMNVPARLKFLKTTATESKRCQELFCRLALARPDAGFSLSSGGREVFRFPAGQTWRERLAVLWPPSITESMVEVPP LCSRAHDGTVPDVQVRGLCGDPRQSQPRADKMLFYVNGRAVTDKLLMRAVRDAYSGRMLGREYPQVLLFIELDPEMVDVN VHPAKSEVRFREERHVFSAVRRAVEAALQQLSATGTPDSPDTAGVADIPGHAASGAAGLRLTPDSPATPRAAARPLGFWG EADAAPIVPRAPRDHEDDEVTLRHMPQPSSADGRTDRTEHTDSAEAPDAHLPHRDDGVRIDFMAGGPSRAAGHTDAAVAE QPDAEYGHAAPHSTPQPAGAPADPAHGGVTVGEYTYLGQIADTYLVVRRKGSTLLLLDQHAVHERVLYERIRRDATQGQT QLLAFPAEMPLHNAEAERLASVWEKLAAMGFALETHGPSLRIRGIPSTLDQRGATEFLREVLADRKGRLPDMWVMMSCRS AIKAGQRLTPDEAAGLIAQWLEVPDREFCPHGRPAVLRFTPADLEKMFKRTG
Sequences:
>Translated_692_residues MTQDNTPQRKRIQLLPDALRNQIAAGEVVERPSSVVKELVENSLDAGARTVEVAIEDGGRSLITVRDDGDGIDAAELELA VTRHATSKVTTFDELMRIASYGFRGEALPSIASVSDFRMTSAPAQRTAADTAPEASCIHVRHGSIISHGPAALSRGTLVE VRDLFMNVPARLKFLKTTATESKRCQELFCRLALARPDAGFSLSSGGREVFRFPAGQTWRERLAVLWPPSITESMVEVPP LCSRAHDGTVPDVQVRGLCGDPRQSQPRADKMLFYVNGRAVTDKLLMRAVRDAYSGRMLGREYPQVLLFIELDPEMVDVN VHPAKSEVRFREERHVFSAVRRAVEAALQQLSATGTPDSPDTAGVADIPGHAASGAAGLRLTPDSPATPRAAARPLGFWG EADAAPIVPRAPRDHEDDEVTLRHMPQPSSADGRTDRTEHTDSAEAPDAHLPHRDDGVRIDFMAGGPSRAAGHTDAAVAE QPDAEYGHAAPHSTPQPAGAPADPAHGGVTVGEYTYLGQIADTYLVVRRKGSTLLLLDQHAVHERVLYERIRRDATQGQT QLLAFPAEMPLHNAEAERLASVWEKLAAMGFALETHGPSLRIRGIPSTLDQRGATEFLREVLADRKGRLPDMWVMMSCRS AIKAGQRLTPDEAAGLIAQWLEVPDREFCPHGRPAVLRFTPADLEKMFKRTG >Mature_691_residues TQDNTPQRKRIQLLPDALRNQIAAGEVVERPSSVVKELVENSLDAGARTVEVAIEDGGRSLITVRDDGDGIDAAELELAV TRHATSKVTTFDELMRIASYGFRGEALPSIASVSDFRMTSAPAQRTAADTAPEASCIHVRHGSIISHGPAALSRGTLVEV RDLFMNVPARLKFLKTTATESKRCQELFCRLALARPDAGFSLSSGGREVFRFPAGQTWRERLAVLWPPSITESMVEVPPL CSRAHDGTVPDVQVRGLCGDPRQSQPRADKMLFYVNGRAVTDKLLMRAVRDAYSGRMLGREYPQVLLFIELDPEMVDVNV HPAKSEVRFREERHVFSAVRRAVEAALQQLSATGTPDSPDTAGVADIPGHAASGAAGLRLTPDSPATPRAAARPLGFWGE ADAAPIVPRAPRDHEDDEVTLRHMPQPSSADGRTDRTEHTDSAEAPDAHLPHRDDGVRIDFMAGGPSRAAGHTDAAVAEQ PDAEYGHAAPHSTPQPAGAPADPAHGGVTVGEYTYLGQIADTYLVVRRKGSTLLLLDQHAVHERVLYERIRRDATQGQTQ LLAFPAEMPLHNAEAERLASVWEKLAAMGFALETHGPSLRIRGIPSTLDQRGATEFLREVLADRKGRLPDMWVMMSCRSA IKAGQRLTPDEAAGLIAQWLEVPDREFCPHGRPAVLRFTPADLEKMFKRTG
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=341, Percent_Identity=30.791788856305, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI4505911, Length=374, Percent_Identity=29.9465240641711, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI189458898, Length=385, Percent_Identity=29.6103896103896, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310128478, Length=343, Percent_Identity=30.6122448979592, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4505913, Length=343, Percent_Identity=30.6122448979592, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI189458896, Length=363, Percent_Identity=29.4765840220386, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI310128480, Length=316, Percent_Identity=27.5316455696203, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI263191589, Length=247, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI1790612, Length=405, Percent_Identity=41.7283950617284, Blast_Score=256, Evalue=3e-69, Organism=Caenorhabditis elegans, GI71991825, Length=328, Percent_Identity=33.2317073170732, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17562796, Length=359, Percent_Identity=25.9052924791086, Blast_Score=126, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=355, Percent_Identity=30.9859154929577, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324247, Length=363, Percent_Identity=28.099173553719, Blast_Score=124, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=153, Percent_Identity=32.6797385620915, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323063, Length=365, Percent_Identity=24.3835616438356, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17136968, Length=364, Percent_Identity=31.3186813186813, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI17136970, Length=360, Percent_Identity=27.7777777777778, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 75345; Mature: 75214
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDNTPQRKRIQLLPDALRNQIAAGEVVERPSSVVKELVENSLDAGARTVEVAIEDGGR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCC SLITVRDDGDGIDAAELELAVTRHATSKVTTFDELMRIASYGFRGEALPSIASVSDFRMT EEEEEECCCCCCCHHHEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC SAPAQRTAADTAPEASCIHVRHGSIISHGPAALSRGTLVEVRDLFMNVPARLKFLKTTAT CCCHHHHHCCCCCCCCEEEEECCCEECCCCHHHCCCCHHHHHHHHHCCCHHHEEHHHHHH ESKRCQELFCRLALARPDAGFSLSSGGREVFRFPAGQTWRERLAVLWPPSITESMVEVPP HHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCHHHCEEEECCCHHHHHHHHCCC LCSRAHDGTVPDVQVRGLCGDPRQSQPRADKMLFYVNGRAVTDKLLMRAVRDAYSGRMLG HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC REYPQVLLFIELDPEMVDVNVHPAKSEVRFREERHVFSAVRRAVEAALQQLSATGTPDSP CCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DTAGVADIPGHAASGAAGLRLTPDSPATPRAAARPLGFWGEADAAPIVPRAPRDHEDDEV CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TLRHMPQPSSADGRTDRTEHTDSAEAPDAHLPHRDDGVRIDFMAGGPSRAAGHTDAAVAE CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHCC QPDAEYGHAAPHSTPQPAGAPADPAHGGVTVGEYTYLGQIADTYLVVRRKGSTLLLLDQH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHEEEEEEECCCEEEEECHH AVHERVLYERIRRDATQGQTQLLAFPAEMPLHNAEAERLASVWEKLAAMGFALETHGPSL HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCEE RIRGIPSTLDQRGATEFLREVLADRKGRLPDMWVMMSCRSAIKAGQRLTPDEAAGLIAQW EEECCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEVPDREFCPHGRPAVLRFTPADLEKMFKRTG HHCCCHHCCCCCCCEEEEECHHHHHHHHHHCC >Mature Secondary Structure TQDNTPQRKRIQLLPDALRNQIAAGEVVERPSSVVKELVENSLDAGARTVEVAIEDGGR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCC SLITVRDDGDGIDAAELELAVTRHATSKVTTFDELMRIASYGFRGEALPSIASVSDFRMT EEEEEECCCCCCCHHHEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC SAPAQRTAADTAPEASCIHVRHGSIISHGPAALSRGTLVEVRDLFMNVPARLKFLKTTAT CCCHHHHHCCCCCCCCEEEEECCCEECCCCHHHCCCCHHHHHHHHHCCCHHHEEHHHHHH ESKRCQELFCRLALARPDAGFSLSSGGREVFRFPAGQTWRERLAVLWPPSITESMVEVPP HHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCHHHCEEEECCCHHHHHHHHCCC LCSRAHDGTVPDVQVRGLCGDPRQSQPRADKMLFYVNGRAVTDKLLMRAVRDAYSGRMLG HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC REYPQVLLFIELDPEMVDVNVHPAKSEVRFREERHVFSAVRRAVEAALQQLSATGTPDSP CCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DTAGVADIPGHAASGAAGLRLTPDSPATPRAAARPLGFWGEADAAPIVPRAPRDHEDDEV CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TLRHMPQPSSADGRTDRTEHTDSAEAPDAHLPHRDDGVRIDFMAGGPSRAAGHTDAAVAE CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHCC QPDAEYGHAAPHSTPQPAGAPADPAHGGVTVGEYTYLGQIADTYLVVRRKGSTLLLLDQH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHEEEEEEECCCEEEEECHH AVHERVLYERIRRDATQGQTQLLAFPAEMPLHNAEAERLASVWEKLAAMGFALETHGPSL HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCEE RIRGIPSTLDQRGATEFLREVLADRKGRLPDMWVMMSCRSAIKAGQRLTPDEAAGLIAQW EEECCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEVPDREFCPHGRPAVLRFTPADLEKMFKRTG HHCCCHHCCCCCCCEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA