| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358163
Identifier: 78358163
GI number: 78358163
Start: 3114360
End: 3114935
Strand: Direct
Name: 78358163
Synonym: Dde_3123
Alternate gene names: NA
Gene position: 3114360-3114935 (Clockwise)
Preceding gene: 78358162
Following gene: 78358164
Centisome position: 83.49
GC content: 58.68
Gene sequence:
>576_bases ATGGCCAGAAGCCGTGATGCACATATATGCGCCCGCTGTGCCGCACATTCCGGCACCTGCTGCCGGATGCAGCCCGGCAA TGAAGAGCTGTGCTTTCCGCTTTCGCGCAGCGAATGGCAGCGCATTGTGGAGCATTGCAATGACAAGGGCGGGTTTGCCA GCCAGCCCAATACAAAACCGTTCCTGCAGTGTATGAAACGCCTTTTTCCCGCCGATGAAAAACGGCTGGAGGCCATTTTT CCCCCTCACGGGGAGCATCTGCGCCTTGCCTCGGACAATGAAGGCCGCTGCCTTTTCCTTTCCGCTGCCGGCTGCACTCT TCCCCGCGAGACACGTCCGTGGTATTGCCGCCTGTTCCCTTTCTGGTTTATGCCCAACGGCATGCTGACCATGTTCACTC CGGACGAGTGTCTCGTCTATCTGGAGTCACGCTCCGTCAGAGACGCCATGCAGGAACTGGGCGTTACAGAAAACGAACTG CGCCTGATGTTCGGCCGCCTGCGACTTGCGTGGGGGCTTGATCCGGAGCATGACGAAGACGGCAACCGCTATCCGCTTTG CGACCATACCCGATAA
Upstream 100 bases:
>100_bases ACCGCACCACGCACAAAGGCGCCCCCGGGCGCGAATTCACCATTGTGGTGCTGCGCGGCTTCAAAGGCACATGGCCGCGC GAACAACAGGAGCGTTACTG
Downstream 100 bases:
>100_bases AAATATCATGAAACGTTTTCTCACATACTTTCTTGTCAGCGTCACAGGTCTTGCCCTGCTGGGCATGCTCGGGCTGGGCG GCATCTATATATGGGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKPFLQCMKRLFPADEKRLEAIF PPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFPFWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENEL RLMFGRLRLAWGLDPEHDEDGNRYPLCDHTR
Sequences:
>Translated_191_residues MARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKPFLQCMKRLFPADEKRLEAIF PPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFPFWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENEL RLMFGRLRLAWGLDPEHDEDGNRYPLCDHTR >Mature_190_residues ARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKPFLQCMKRLFPADEKRLEAIFP PHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFPFWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENELR LMFGRLRLAWGLDPEHDEDGNRYPLCDHTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22085; Mature: 21953
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKP CCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCHH FLQCMKRLFPADEKRLEAIFPPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFP HHHHHHHHCCCCCHHHEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEE FWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENELRLMFGRLRLAWGLDPEHDED HEECCCCEEEEECCHHEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCC GNRYPLCDHTR CCCCCCCCCCC >Mature Secondary Structure ARSRDAHICARCAAHSGTCCRMQPGNEELCFPLSRSEWQRIVEHCNDKGGFASQPNTKP CCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCHH FLQCMKRLFPADEKRLEAIFPPHGEHLRLASDNEGRCLFLSAAGCTLPRETRPWYCRLFP HHHHHHHHCCCCCHHHEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEE FWFMPNGMLTMFTPDECLVYLESRSVRDAMQELGVTENELRLMFGRLRLAWGLDPEHDED HEECCCCEEEEECCHHEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCC GNRYPLCDHTR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA