Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78357778

Identifier: 78357778

GI number: 78357778

Start: 2740683

End: 2741483

Strand: Direct

Name: 78357778

Synonym: Dde_2736

Alternate gene names: NA

Gene position: 2740683-2741483 (Clockwise)

Preceding gene: 78357777

Following gene: 78357783

Centisome position: 73.47

GC content: 58.8

Gene sequence:

>801_bases
ATGCTGCTTGATATACATACCCACGCGTTTCATCCCAAAATAGCCTCCAAAGCCGTGGCCCAGCTGGAAAGCCACTACGG
CATCACCATGAGCGGCTCCGGCCTGCTGGAAGATCTTGATGCGGTAACCCGCAAAGCCGGACTGGACGGCTATGTGGTGC
ACAACGCGGCCACCGCTGCGGCACAGGTTGTGCCTGCCAACAACTTTGCCATGGCGCTCAGCCTCACCTGCCCCCGTGCC
GTGGCATTCGGCAGCATCCATCCCGATTATGAAGAATGGGAGGCACAGCTGAAGCGTCTGCAGGCGCACGGCATACGCGG
CATCAAGCTGCACCCCGAGTTTCAGGGGTTCTGGCTGGATGACCCGCGGCTGGAACCTATTTTTGAAACCATCGGCGACA
GCATGATGATCATGTGTCACATCGGCGACGCACTGCCGCCCGATGAAAACCCTTCATGCCCGTACAAGCTGGCGGCACTG
ATTAAAAAATTTCCCCGCGTGCGGTTCATCGCCGCACACATGGGCGGCTACCGCCACTGGAAGTATGCGCTGGAAGCACT
GGCGGGCAAAAACGTCTACATGGATACTTCCAGCTCACTGGCGTTCATCGACGATGACACCCTGCACGGTCTATGGAAAA
AGCACCCGCGTGAACAATGGCTTTTCGGCAGTGACTGGCCGCTGTTTGATCCTGCATCGGAACAGAAAATGCTCCGGAAA
CGGCTGGGCATCAGCGACAGCGCTCTGGCCGATCTCATGGGCAACGGTGCGCTGGCACTGGGGCTCAGGGCGCAGGACTG
A

Upstream 100 bases:

>100_bases
GAATGGCTCCACGCCCTGTTCACCGCGTAACCCCGCCGCTACGCCAAACCGCCCGCGCCCCGCTGTTTACCGCGGAGGCA
GCGGCCACACTCTTACTGTC

Downstream 100 bases:

>100_bases
AACACTGCGTTCCGCATGGGAACCTTGCACAAAAAAACACCGCATCCTTAATGAATGCGGTGTTTTTTTGTGTCTGACAT
ACAGGCATGCACATACCGGC

Product: amidohydrolase family protein

Products: NA

Alternate protein names: Amidohydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase 2 Family Protein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAAAQVVPANNFAMALSLTCPRA
VAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLDDPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAAL
IKKFPRVRFIAAHMGGYRHWKYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK
RLGISDSALADLMGNGALALGLRAQD

Sequences:

>Translated_266_residues
MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAAAQVVPANNFAMALSLTCPRA
VAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLDDPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAAL
IKKFPRVRFIAAHMGGYRHWKYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK
RLGISDSALADLMGNGALALGLRAQD
>Mature_266_residues
MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAAAQVVPANNFAMALSLTCPRA
VAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLDDPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAAL
IKKFPRVRFIAAHMGGYRHWKYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK
RLGISDSALADLMGNGALALGLRAQD

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29458; Mature: 29458

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAA
CEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHH
AQVVPANNFAMALSLTCPRAVAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLD
HEEECCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEECC
DPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAALIKKFPRVRFIAAHMGGYRHW
CCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHCCHHHH
KYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK
HHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHH
RLGISDSALADLMGNGALALGLRAQD
HCCCCHHHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure
MLLDIHTHAFHPKIASKAVAQLESHYGITMSGSGLLEDLDAVTRKAGLDGYVVHNAATAA
CEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHH
AQVVPANNFAMALSLTCPRAVAFGSIHPDYEEWEAQLKRLQAHGIRGIKLHPEFQGFWLD
HEEECCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEECC
DPRLEPIFETIGDSMMIMCHIGDALPPDENPSCPYKLAALIKKFPRVRFIAAHMGGYRHW
CCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHCCHHHH
KYALEALAGKNVYMDTSSSLAFIDDDTLHGLWKKHPREQWLFGSDWPLFDPASEQKMLRK
HHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHH
RLGISDSALADLMGNGALALGLRAQD
HCCCCHHHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA