Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is yeaH [C]

Identifier: 78221259

GI number: 78221259

Start: 38780

End: 40108

Strand: Direct

Name: yeaH [C]

Synonym: Gmet_0031

Alternate gene names: 78221259

Gene position: 38780-40108 (Clockwise)

Preceding gene: 78221258

Following gene: 78221260

Centisome position: 0.97

GC content: 61.1

Gene sequence:

>1329_bases
GTGCGGCGTAGCGCTGCTACGCCTCCGCGCAATCATTCGATCGCCTTGACCTTGCGAACAATCCACGTTTCTATACGGTC
TGAAACCAACATGAAAAACGAAGACTCCAAAATCTTTAAAATATGGGACATCTCCTCCCTTGCCCCCGGGCCTGAAGGGT
CCTACACCACCCGGATTCGCTCCCTGGATGAACTTCTGGAGCGGGACCGGCTCCGGGAAGAGGACGGCTTTCCGCGCAAG
ATCCGGATCGGCAAGCTCATCAAGCCGGGTAAGGGGAAACAGGAGAAGTTCGTGGTGGTTCCCACCACGGTGGAAGAGAA
GTTCATGCACGACCGGGCCCCCACTCCTCCCGAAGAGGAGGAACCCATGGGGGGGACCGGCGACGAGGCGGAAGGGGATA
TCCTTGGCGAGCAGCCGGTCCGCCCCGAGCAGGGGGCGGGAAGCGGCACCGCGGGGCACGGTGGCGGCGAGGGGCATGAA
CTGGAGTCATCGGCCTACGACCTGGGGCGGATTCTGACGGAGCGGTTCAATCTGCCGAACCTGAAGGAAAAGGGGAAGAA
GAGCTCCCTCTCCCACTACACCTACGACCTCACCGACCGCAACCGGGGCTTCGGCCAGATCCTCGAAAAGAAGCAGACCC
TCAAGCGGGTCATCGAGACCAACATCGCCCTGGGGAACATCGATGATGTGACCAACATCGACACGACCCGCCTCCTCATC
GACCCCCGGGACCGAATCTTCCGGATCCTCTCCCGGGAACTGGAGTACGAGTCCCAGGCCCTCGTCTTCTTCGTCCGCGA
CTATTCCGGATCCATGGAGGGGAAGGCGTCGGAGGTGATCTGCTCCCAGCACGTGCTCATCTACAGCTGGCTCCTCTACC
AGTTCGCCAGGCAGGTGGAGACCCGCTTCGTCCTCCATGACAACGACGCCCGGGAGGTCCCCGACTTCTACACCTACTAC
AACCTCCGGGTTGCCGGGGGAACGAGGGTGGCGGCGGCCTACAAGATGGTGAACGACATCGTGGAGCAGGAGAGCCTTGC
CAAGGATTACAACATCTACGTCTTCCACGGCACCGACGGCGACGACTGGGACACCAACGGCGAGGAGACCATTCCCGAAC
TGCGGCGGATGCTCACCTACACCAACCGGGTGGGGATCACCATCGCCGAGCATAACGCCTACGGCTCCCGCGGGGCCACC
GAGGTGGAGCGGTACCTGAAGGGGTCGGGGCTCCTGGATGAAAAGCCGGAGTTTTTGCGCATGGATGTGATGGGAGAGGA
TGCCGACGAGACGCGGATTATCGATGGGATAAAACGTTTGATTTCTTAG

Upstream 100 bases:

>100_bases
GCGCCCAGAAGACCATAGAGTACTTCTGCACGCAGGAAGACGAGATCTAGATAGAAACGCGGCTTTTCCGCAATCTCTGC
GTTGATCTTCATAATTGCTT

Downstream 100 bases:

>100_bases
GTGTCATAGGGTAGGGGCGCTGCTTGCCGCGCCCGTCACCGGATGCAAGGGCGCAGCAAGCGGCGCCCCTCCATAGACCT
GAATATGGAACTCATCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIRSLDELLERDRLREEDGFPRK
IRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEEEPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHE
LESSAYDLGRILTERFNLPNLKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI
DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVETRFVLHDNDAREVPDFYTYY
NLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDGDDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGAT
EVERYLKGSGLLDEKPEFLRMDVMGEDADETRIIDGIKRLIS

Sequences:

>Translated_442_residues
MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIRSLDELLERDRLREEDGFPRK
IRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEEEPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHE
LESSAYDLGRILTERFNLPNLKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI
DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVETRFVLHDNDAREVPDFYTYY
NLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDGDDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGAT
EVERYLKGSGLLDEKPEFLRMDVMGEDADETRIIDGIKRLIS
>Mature_442_residues
MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIRSLDELLERDRLREEDGFPRK
IRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEEEPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHE
LESSAYDLGRILTERFNLPNLKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI
DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVETRFVLHDNDAREVPDFYTYY
NLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDGDDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGAT
EVERYLKGSGLLDEKPEFLRMDVMGEDADETRIIDGIKRLIS

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=159, Percent_Identity=27.6729559748428, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014230
- InterPro:   IPR006698 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 50129; Mature: 50129

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIR
CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
SLDELLERDRLREEDGFPRKIRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEE
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCC
EPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHELESSAYDLGRILTERFNLPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI
HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVE
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRFVLHDNDAREVPDFYTYYNLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDG
HEEEEECCCCHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
DDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGATEVERYLKGSGLLDEKPEFLR
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEE
MDVMGEDADETRIIDGIKRLIS
EEECCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MRRSAATPPRNHSIALTLRTIHVSIRSETNMKNEDSKIFKIWDISSLAPGPEGSYTTRIR
CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
SLDELLERDRLREEDGFPRKIRIGKLIKPGKGKQEKFVVVPTTVEEKFMHDRAPTPPEEE
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCC
EPMGGTGDEAEGDILGEQPVRPEQGAGSGTAGHGGGEGHELESSAYDLGRILTERFNLPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LKEKGKKSSLSHYTYDLTDRNRGFGQILEKKQTLKRVIETNIALGNIDDVTNIDTTRLLI
HHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
DPRDRIFRILSRELEYESQALVFFVRDYSGSMEGKASEVICSQHVLIYSWLLYQFARQVE
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRFVLHDNDAREVPDFYTYYNLRVAGGTRVAAAYKMVNDIVEQESLAKDYNIYVFHGTDG
HEEEEECCCCHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
DDWDTNGEETIPELRRMLTYTNRVGITIAEHNAYGSRGATEVERYLKGSGLLDEKPEFLR
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEE
MDVMGEDADETRIIDGIKRLIS
EEECCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA