| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is metK [H]
Identifier: 78067900
GI number: 78067900
Start: 3597972
End: 3599159
Strand: Reverse
Name: metK [H]
Synonym: Bcep18194_A6431
Alternate gene names: 78067900
Gene position: 3599159-3597972 (Counterclockwise)
Preceding gene: 78067902
Following gene: 78067898
Centisome position: 97.43
GC content: 65.15
Gene sequence:
>1188_bases GTGGCAAACGATTATCTCTTTACGTCCGAATCCGTCTCTGAAGGCCATCCGGACAAAGTCGCGGACCAAATCTCGGACGC GATCCTCGACGCCATCCTCGAGCAGGACAAGTATTCCCGCGTTGCGGCGGAAACGCTGTGCAACACGGGTCTTGTCGTGC TGGCCGGTGAAATCACCACGACGGCCAACATCGACTACATCCAGATCGCGCGCGACACGATCAAGCGCATCGGCTACGAC AACACCGACTACGGCATCGACTACAAGGGTTGTGCCGTGCTCGTCGCGTACGACAAGCAGTCGCCGGACATCGCCCAGGG CGTCGATCGTGCACACGACGACAACCTCGACCAAGGCGCGGGCGACCAGGGTCTGATGTTCGGTTACGCGTGCGATGAAA CGCCGGAACTGATGCCGCTGCCGATCTACCTGTCGCACCGCCTCGTCGAGCGCCAGGCCAGCCTGCGCCGCGACGGCCGC CTGCAATGGCTGCGCCCGGACGCGAAGTCGCAGGTGACGGTCCGCTACGTCGACGGCAAGCCGCATTCGATCGACACCGT CGTGCTGTCGACGCAGCACGCACCGGACATCGAGCTGCCGGCGCTGCGCGAAGCCGTGATCGAGGAAATCATCAAGCCGA CGCTGCCGGCCGACCTGATCAAGGGTGACATCAAGTTCCTGGTGAACCCGACCGGCCGGTTCGTGATCGGCGGCCCGCAG GGCGACTGCGGCCTGACCGGCCGCAAGATCATCGTCGATACGTACGGCGGTGCCGCACCGCACGGCGGCGGCGCGTTCTC GGGCAAGGATCCGTCGAAGGTCGACCGTTCGGCTGCATACGCAGGCCGCTACGTCGCGAAGAACATCGTCGCCGCCGGCC TCGCGTCGCGCGCGCTGATCCAGGTGTCGTACGCGATCGGCGTTGCCGAGCCGACCTCAGTGATGGTCAACACGTTCGGC ACGGGCCGCGTGTCGGATGCGGTGATCACGAAGCTCGTGCGCGAGCATTTCGACCTGCGTCCGAAGGGCATCATCAAGAT GCTCGACCTGCTGCGCCCGATCTACGAGAAGACCGCTGCTTACGGCCACTTCGGCCGCGAAGAGCCGGAATTCTCGTGGG AAGCGACCGACAAGGCGCTCGCCCTGGCCGAAGCGGCCGGCGTCGAGCCGACGGCACGCGTCGCGTAA
Upstream 100 bases:
>100_bases CGCGCTGCCCGGTCCTGGTAATCCGCTAAAGCGTCGCCGCTTCAGGCCCAACGAAGCTGGCTACGTGAAACCAACCGTAA CCACACAGGAGCCTGAAAAA
Downstream 100 bases:
>100_bases GCGTCGTTCGCTGCAAATGAAAAACCCCGGCAAAGCCGGGGTTTTTTATGGGTTCCGATCGTCGTGGCAATCGGACCGGC GGGCGGCAGCGCGACGGCGA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYD NTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGR LQWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA
Sequences:
>Translated_395_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYD NTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGR LQWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA >Mature_394_residues ANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDN TDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRL QWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQG DCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGT GRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=378, Percent_Identity=58.2010582010582, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI5174529, Length=378, Percent_Identity=56.3492063492063, Blast_Score=417, Evalue=1e-116, Organism=Escherichia coli, GI1789311, Length=385, Percent_Identity=69.6103896103896, Blast_Score=535, Evalue=1e-153, Organism=Caenorhabditis elegans, GI25145633, Length=380, Percent_Identity=58.6842105263158, Blast_Score=430, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17538494, Length=376, Percent_Identity=58.5106382978723, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17538498, Length=376, Percent_Identity=58.7765957446808, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17551082, Length=389, Percent_Identity=55.7840616966581, Blast_Score=418, Evalue=1e-117, Organism=Caenorhabditis elegans, GI32565905, Length=376, Percent_Identity=53.1914893617021, Blast_Score=361, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25145635, Length=332, Percent_Identity=57.2289156626506, Blast_Score=361, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565911, Length=328, Percent_Identity=57.6219512195122, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565903, Length=301, Percent_Identity=57.8073089700997, Blast_Score=325, Evalue=2e-89, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=57.1428571428571, Blast_Score=107, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6320710, Length=379, Percent_Identity=59.1029023746702, Blast_Score=430, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6323209, Length=378, Percent_Identity=59.2592592592593, Blast_Score=427, Evalue=1e-120, Organism=Drosophila melanogaster, GI45552159, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580529, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580537, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580533, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580535, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580531, Length=376, Percent_Identity=55.0531914893617, Blast_Score=391, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580527, Length=374, Percent_Identity=54.5454545454545, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580525, Length=374, Percent_Identity=54.5454545454545, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580541, Length=375, Percent_Identity=52.2666666666667, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=54.6218487394958, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42717; Mature: 42586
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITT CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCC PHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGREEPEFSWEATDKALALAEAAGVEPTARVA HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITT CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCC PHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQ CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGREEPEFSWEATDKALALAEAAGVEPTARVA HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA