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The map label for this gene is 78067898

Identifier: 78067898

GI number: 78067898

Start: 3596372

End: 3597217

Strand: Reverse

Name: 78067898

Synonym: Bcep18194_A6429

Alternate gene names: NA

Gene position: 3597217-3596372 (Counterclockwise)

Preceding gene: 78067900

Following gene: 78067896

Centisome position: 97.38

GC content: 65.13

Gene sequence:

>846_bases
ATGGTGCTGTTCGCGGCATCCGGCGCCGATTTACAATCGTGTCACATTCACACAATAAGCGTCTGGCATCCCATGTCGTC
TCCATTGCAGTCGGAATCGATCCGCGCGCAAGTCGCGGAATTGCGCGAGCGCGGCTTTGTCGTCGCGCGTGGCCTCGTCG
GCGAGGAACAATGCGCCGCGCTCAGACAGATCGCGGAGCGCCAGTTGCGGGAGGCGGCCGAGCCGATCGAGTTCGAGGCG
GACCTGCGCTACCCGGGCGCACCCGAGTCCAAGCATGCGCCGGGCGGGCATACGGTGCGGCGGCTGCTCGATGCGTACTC
GCGCGATCCGGCCTTCGCCGAGCGTGCGATCGCACCTGAAATCGGTGCGTGGATGCGTGCGTATTTCGGTGAAGAACCGG
TGCTGTCGCGCGCGCATCACAACTGCATGATGACGAAGCACCCCGCGTACGGCAGCCTGACCGGCTGGCATCGCGATTTC
CGCTACTGGTCGTTCGAGCGCCCGGACATGGTGTCGGTGTGGCTCGCGCTCGGGCCGGAAACGAACGAGAACGGCGCACT
GTGGCTCGTACCGGGGTCGCATACGGCCGAATTCGGGCCAGAAGCATTCGACGATGCGAAGTTCTTCCGCAGCGACCTGC
CGGCGAACAAGAAGATGATCGACGCGGCCACGTGCCCGTCGCTGCAGACGGGCGACGTCGTGTTCTTCCACAGCAACACG
CTGCATTCGGCCGGGCAGAACCGTTCCGACCAGGTGAAGTTTTCGCTCGTGTACACGTACCACGGCGCGAGCAACCGGCC
GGTGCCGGGCACGCGCTCGGCGTCGAGGCCGGAAGTGCAGTTCTAG

Upstream 100 bases:

>100_bases
GGCGTGTGCCGCATACCGCCTGTCGGTGAGGCCAGCGCCGCGGCGAACAGTTCCCTTGAGCCGGATCAAATCCGCGATTG
GCATGCCCCTGCGCACGACA

Downstream 100 bases:

>100_bases
GTTCGGATCGGACGGGCGGTGACACCGCCGCGATCACGCGATGCGGCGCATCGCGGGCGTTTGAAGCAACGGGCGGCCTG
GCCGCCCGTTTCGTTTGGTG

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Dioxygenase; Deoxygenase; Phytanoyl-CoA Dioxygenase Family Protein; L-Proline 4-Hydroxylase; Hypophosphite Dioxygenase; Potassium Channel Protein; Phytanoyl-CoA Dioxygenase PhyH Family

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVLFAASGADLQSCHIHTISVWHPMSSPLQSESIRAQVAELRERGFVVARGLVGEEQCAALRQIAERQLREAAEPIEFEA
DLRYPGAPESKHAPGGHTVRRLLDAYSRDPAFAERAIAPEIGAWMRAYFGEEPVLSRAHHNCMMTKHPAYGSLTGWHRDF
RYWSFERPDMVSVWLALGPETNENGALWLVPGSHTAEFGPEAFDDAKFFRSDLPANKKMIDAATCPSLQTGDVVFFHSNT
LHSAGQNRSDQVKFSLVYTYHGASNRPVPGTRSASRPEVQF

Sequences:

>Translated_281_residues
MVLFAASGADLQSCHIHTISVWHPMSSPLQSESIRAQVAELRERGFVVARGLVGEEQCAALRQIAERQLREAAEPIEFEA
DLRYPGAPESKHAPGGHTVRRLLDAYSRDPAFAERAIAPEIGAWMRAYFGEEPVLSRAHHNCMMTKHPAYGSLTGWHRDF
RYWSFERPDMVSVWLALGPETNENGALWLVPGSHTAEFGPEAFDDAKFFRSDLPANKKMIDAATCPSLQTGDVVFFHSNT
LHSAGQNRSDQVKFSLVYTYHGASNRPVPGTRSASRPEVQF
>Mature_281_residues
MVLFAASGADLQSCHIHTISVWHPMSSPLQSESIRAQVAELRERGFVVARGLVGEEQCAALRQIAERQLREAAEPIEFEA
DLRYPGAPESKHAPGGHTVRRLLDAYSRDPAFAERAIAPEIGAWMRAYFGEEPVLSRAHHNCMMTKHPAYGSLTGWHRDF
RYWSFERPDMVSVWLALGPETNENGALWLVPGSHTAEFGPEAFDDAKFFRSDLPANKKMIDAATCPSLQTGDVVFFHSNT
LHSAGQNRSDQVKFSLVYTYHGASNRPVPGTRSASRPEVQF

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI5453884, Length=255, Percent_Identity=25.4901960784314, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI154937352, Length=244, Percent_Identity=23.3606557377049, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31291; Mature: 31291

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFAASGADLQSCHIHTISVWHPMSSPLQSESIRAQVAELRERGFVVARGLVGEEQCAA
CEEEECCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH
LRQIAERQLREAAEPIEFEADLRYPGAPESKHAPGGHTVRRLLDAYSRDPAFAERAIAPE
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHH
IGAWMRAYFGEEPVLSRAHHNCMMTKHPAYGSLTGWHRDFRYWSFERPDMVSVWLALGPE
HHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCHHCCCEECCCCCCCEEEEEEECCC
TNENGALWLVPGSHTAEFGPEAFDDAKFFRSDLPANKKMIDAATCPSLQTGDVVFFHSNT
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCEEEEECCC
LHSAGQNRSDQVKFSLVYTYHGASNRPVPGTRSASRPEVQF
HHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLFAASGADLQSCHIHTISVWHPMSSPLQSESIRAQVAELRERGFVVARGLVGEEQCAA
CEEEECCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH
LRQIAERQLREAAEPIEFEADLRYPGAPESKHAPGGHTVRRLLDAYSRDPAFAERAIAPE
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCHH
IGAWMRAYFGEEPVLSRAHHNCMMTKHPAYGSLTGWHRDFRYWSFERPDMVSVWLALGPE
HHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCCHHCCCEECCCCCCCEEEEEEECCC
TNENGALWLVPGSHTAEFGPEAFDDAKFFRSDLPANKKMIDAATCPSLQTGDVVFFHSNT
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCEEEEECCC
LHSAGQNRSDQVKFSLVYTYHGASNRPVPGTRSASRPEVQF
HHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA