| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yycG [H]
Identifier: 78066053
GI number: 78066053
Start: 1557240
End: 1559627
Strand: Direct
Name: yycG [H]
Synonym: Bcep18194_A4582
Alternate gene names: 78066053
Gene position: 1557240-1559627 (Clockwise)
Preceding gene: 78066052
Following gene: 78066054
Centisome position: 42.15
GC content: 69.51
Gene sequence:
>2388_bases ATGAAACCCGACTCCGTTTCTCCACGGCGGCGCCTCGGCCGCCGATTCCTGATCGAATGGATCGCGATCGGCTGCCTCGG GGTCGCCGTGATCCTCGCGTGCGCGGTCGGCCGCATGTCGGCGAGCGTCGACGGCCTGATCTACGACCGGCTGCTGATGC TGCGCAGTCTGCCGTTGTCACCCGACGTGGTCGTCGTCGACATCGACAACCAGAGCGTGTCCGCGCTCGGCCGCTGGCCG TGGCCGCGCGACGTGCATGCGCGGCTGCTCGACACGCTGGCGCGCGCGCAACCGGCCGCCGTCGTCTACGACGTGCTGTT TACCGAACCGTCGCCGGAAGATCGCGCGTTCGCGGACGCAATGACCCACGTGCCGACCTTCCTGCCCGTGCTGTTGAGTC CCGAGCAGGCCGACGGCACGCGCGCGGTCGATCCGCCGGTGGCCGCGCTCGCGGCGCGCGCGGTCGGGCTCGGCCACATC AACCTCGAAGTCGATCGCGACGGCATCGTCCGCAGCGTGGCGCTGTACGAAAGCGACGGCCGCGTGCGCTGGCCGCAGCT GATGGTGCCCGTGTATCGCGCGATCCAGGGCGGCCAGCTGCATCCGGTCGGCGGTGCGCCCGGCGCGCATGCGCACGACC TGTCGCGCGACGCGACCGGCGAGGGCCGCTACCTGATCCCGTTCAGCCGCAACACACCCGCGTATCCGACCTTGTCGTTC GACGACGTGCTCGAAGGGCGCGTGAAGCCCGACGCGCTGCGCGGCAAGATCGTCGTCGTCGGTGTGACGGCGTCGGGGCT GTACGACCGCTTCGCGACGCCCGTGTCCGGCGAATTCGGGCCGCTCGCCGGCGTGTATATCCACGCCAACGTGCTCGACA TGCTGGCGACCGGCAGCGCGATCTCGCCCGCGTCGCGCGCCGGGCTGTTCGTCGCGTCGCTGCTGCCGCTCGCCGCGCTG CTGGGCGGGTTCCTGATGCTGTCGCCGTGGCGTGCGCTGCTGCTGACGCTGAGCCTTGCCGCGCTGTCGGTCGTCGCGAG CATGGCGCTGCTGTTCGAGGCGCGCATCTGGCTGTCGCCGGCGCCTGCGATCTTCGGGCTGGTCGCCGTCTACCCGATCT GGAACTGGCGGCGTCTGGAAATGACGATGTCGTACCTGCGTCGCGAACTGCAGCGGCTCGCCGACGAGCCGCACCTGCTG CCCGAGGCGCCGCGTACGCGTAGCGTCGGCGGCGACGTGCTCGAGCGGCAGATGGCCCTGATGGCACAGGCCGCGCAGCG CGTGCAGGACATGAAGCGCTTCGTGTGGGACAGCCTCGACAGCATGCCCGAGCCGATCTTCGTGACCGACCTGGCCGGCA CGGTGCTGATCGCGAACCACGCGGCCAAGCGTTACGGGTCGCGCCTGTCGCTGCCGCTGCCGGAAGGGCGGCCGCTGCGC ACGGCGCTCGGCGAGCTGACCTTCATGAAGACCGTCGACGGCAACGCCGAACACGACGTGGCGATCCGCGAACACTGGCC GGCCGTACTCGACCCGACGCTCGAAGCCGAGCACGATGCGATGGCGCGCGGCATCGAGGTGCGCGATCGCGACGGGCTCG ACCATCTGCTACGCTACGCGGCGTGCACGAACGCGCAGGGCCGCGTGACGGGCTGGATCGCCGGCCTTGTCGACGTGACC GAACTGCACGCGGCCGAGCGGCAGCGCGAGGAAGCGCTGCACCTGCTGTCGCACGACATGCGCTCGCCGCAATCGTCGAT TCTCGCGCTCGTCGAGATCGAGCGCGACCGCGCCGAGACCGACGCGATGCGCGGGCTGCTCGCGCGGATCGAGCGCTATG CGCACCGCGCGCTGTCGCTGGCCGACGAGTTCGTGCAGCTGGCGCGTGCGGAGTCGCAGGTGTACCAGCTCGAGGCGACG AGCCTCGTCGACGTGCTGATCGATGCGAGCGACGAAGTGTGGCCGCAGGCGCAGGCGAAGCACATTCGCGTCGACACCGA CGTCGGCACCGAGATGTGCTGGGTGCGCGCCGACCGCTCGCTGATTACGCGCGCGTTCGTGAACCTGCTGAACAATGCAG TCAAATACAGTCCGTCCGCTACCGTGATCACGTGTACGCTGGCGGTCGAGCACGCGTCGAAACGGATGTTCTGTACGATT CGCGATCAGGGTTACGGCATTGCGCCGGAAGATCAGCGGCATCTGTTCGAGCGTTTCAAGCGATTCCATGCCGGCGAGCG GCCCGAAATCTCGGGTTCCGGGCTCGGCATGGCATTCGTGAAGACGGTCGTCACGCGCCATGGGGGCAGCGTGTCGGTCG ACAGCGAGGTGGGTGTCGGCACCGCGGTGACGGTGTCGCTGCCCGCGATCGACGAGCCGTCCGCCTGA
Upstream 100 bases:
>100_bases TATTTCTGGGCCGTGACCGTCGAGGAGTTCGAAGGCGGCAAGTTCTACGAGAAGACCAGTCCGGTCAGCGCGTTCACGCT GTCGCGCTGATTCGCGGCGC
Downstream 100 bases:
>100_bases CAGGGCCGGGCGCGACGGCAGGCATTTGGGGAAAGCCATGAGAAAGGAATGGGCAGCGACCGCGCTGGCGGCGTCGCTGT TGACGGGTTGCGCCGGCGTG
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MKPDSVSPRRRLGRRFLIEWIAIGCLGVAVILACAVGRMSASVDGLIYDRLLMLRSLPLSPDVVVVDIDNQSVSALGRWP WPRDVHARLLDTLARAQPAAVVYDVLFTEPSPEDRAFADAMTHVPTFLPVLLSPEQADGTRAVDPPVAALAARAVGLGHI NLEVDRDGIVRSVALYESDGRVRWPQLMVPVYRAIQGGQLHPVGGAPGAHAHDLSRDATGEGRYLIPFSRNTPAYPTLSF DDVLEGRVKPDALRGKIVVVGVTASGLYDRFATPVSGEFGPLAGVYIHANVLDMLATGSAISPASRAGLFVASLLPLAAL LGGFLMLSPWRALLLTLSLAALSVVASMALLFEARIWLSPAPAIFGLVAVYPIWNWRRLEMTMSYLRRELQRLADEPHLL PEAPRTRSVGGDVLERQMALMAQAAQRVQDMKRFVWDSLDSMPEPIFVTDLAGTVLIANHAAKRYGSRLSLPLPEGRPLR TALGELTFMKTVDGNAEHDVAIREHWPAVLDPTLEAEHDAMARGIEVRDRDGLDHLLRYAACTNAQGRVTGWIAGLVDVT ELHAAERQREEALHLLSHDMRSPQSSILALVEIERDRAETDAMRGLLARIERYAHRALSLADEFVQLARAESQVYQLEAT SLVDVLIDASDEVWPQAQAKHIRVDTDVGTEMCWVRADRSLITRAFVNLLNNAVKYSPSATVITCTLAVEHASKRMFCTI RDQGYGIAPEDQRHLFERFKRFHAGERPEISGSGLGMAFVKTVVTRHGGSVSVDSEVGVGTAVTVSLPAIDEPSA
Sequences:
>Translated_795_residues MKPDSVSPRRRLGRRFLIEWIAIGCLGVAVILACAVGRMSASVDGLIYDRLLMLRSLPLSPDVVVVDIDNQSVSALGRWP WPRDVHARLLDTLARAQPAAVVYDVLFTEPSPEDRAFADAMTHVPTFLPVLLSPEQADGTRAVDPPVAALAARAVGLGHI NLEVDRDGIVRSVALYESDGRVRWPQLMVPVYRAIQGGQLHPVGGAPGAHAHDLSRDATGEGRYLIPFSRNTPAYPTLSF DDVLEGRVKPDALRGKIVVVGVTASGLYDRFATPVSGEFGPLAGVYIHANVLDMLATGSAISPASRAGLFVASLLPLAAL LGGFLMLSPWRALLLTLSLAALSVVASMALLFEARIWLSPAPAIFGLVAVYPIWNWRRLEMTMSYLRRELQRLADEPHLL PEAPRTRSVGGDVLERQMALMAQAAQRVQDMKRFVWDSLDSMPEPIFVTDLAGTVLIANHAAKRYGSRLSLPLPEGRPLR TALGELTFMKTVDGNAEHDVAIREHWPAVLDPTLEAEHDAMARGIEVRDRDGLDHLLRYAACTNAQGRVTGWIAGLVDVT ELHAAERQREEALHLLSHDMRSPQSSILALVEIERDRAETDAMRGLLARIERYAHRALSLADEFVQLARAESQVYQLEAT SLVDVLIDASDEVWPQAQAKHIRVDTDVGTEMCWVRADRSLITRAFVNLLNNAVKYSPSATVITCTLAVEHASKRMFCTI RDQGYGIAPEDQRHLFERFKRFHAGERPEISGSGLGMAFVKTVVTRHGGSVSVDSEVGVGTAVTVSLPAIDEPSA >Mature_795_residues MKPDSVSPRRRLGRRFLIEWIAIGCLGVAVILACAVGRMSASVDGLIYDRLLMLRSLPLSPDVVVVDIDNQSVSALGRWP WPRDVHARLLDTLARAQPAAVVYDVLFTEPSPEDRAFADAMTHVPTFLPVLLSPEQADGTRAVDPPVAALAARAVGLGHI NLEVDRDGIVRSVALYESDGRVRWPQLMVPVYRAIQGGQLHPVGGAPGAHAHDLSRDATGEGRYLIPFSRNTPAYPTLSF DDVLEGRVKPDALRGKIVVVGVTASGLYDRFATPVSGEFGPLAGVYIHANVLDMLATGSAISPASRAGLFVASLLPLAAL LGGFLMLSPWRALLLTLSLAALSVVASMALLFEARIWLSPAPAIFGLVAVYPIWNWRRLEMTMSYLRRELQRLADEPHLL PEAPRTRSVGGDVLERQMALMAQAAQRVQDMKRFVWDSLDSMPEPIFVTDLAGTVLIANHAAKRYGSRLSLPLPEGRPLR TALGELTFMKTVDGNAEHDVAIREHWPAVLDPTLEAEHDAMARGIEVRDRDGLDHLLRYAACTNAQGRVTGWIAGLVDVT ELHAAERQREEALHLLSHDMRSPQSSILALVEIERDRAETDAMRGLLARIERYAHRALSLADEFVQLARAESQVYQLEAT SLVDVLIDASDEVWPQAQAKHIRVDTDVGTEMCWVRADRSLITRAFVNLLNNAVKYSPSATVITCTLAVEHASKRMFCTI RDQGYGIAPEDQRHLFERFKRFHAGERPEISGSGLGMAFVKTVVTRHGGSVSVDSEVGVGTAVTVSLPAIDEPSA
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: COG4252
COG function: function code T; Predicted transmembrane sensor domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=377, Percent_Identity=26.525198938992, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1786600, Length=236, Percent_Identity=28.3898305084746, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786783, Length=222, Percent_Identity=27.9279279279279, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1788549, Length=299, Percent_Identity=25.0836120401338, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=26.1603375527426, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1787894, Length=241, Percent_Identity=27.8008298755187, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789149, Length=226, Percent_Identity=23.4513274336283, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=28.448275862069, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI145693157, Length=230, Percent_Identity=22.1739130434783, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1790346, Length=239, Percent_Identity=25.1046025104602, Blast_Score=66, Evalue=8e-12, Organism=Escherichia coli, GI48994928, Length=257, Percent_Identity=24.9027237354086, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=22.9787234042553, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI1789808, Length=214, Percent_Identity=27.1028037383178, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 86888; Mature: 86888
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDSVSPRRRLGRRFLIEWIAIGCLGVAVILACAVGRMSASVDGLIYDRLLMLRSLPLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDVVVVDIDNQSVSALGRWPWPRDVHARLLDTLARAQPAAVVYDVLFTEPSPEDRAFADA CCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCHHHHHHH MTHVPTFLPVLLSPEQADGTRAVDPPVAALAARAVGLGHINLEVDRDGIVRSVALYESDG HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEECCC RVRWPQLMVPVYRAIQGGQLHPVGGAPGAHAHDLSRDATGEGRYLIPFSRNTPAYPTLSF CEECHHHHHHHHHHHCCCCEECCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCH DDVLEGRVKPDALRGKIVVVGVTASGLYDRFATPVSGEFGPLAGVYIHANVLDMLATGSA HHHHCCCCCCHHHCCEEEEEEECCHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCCC ISPASRAGLFVASLLPLAALLGGFLMLSPWRALLLTLSLAALSVVASMALLFEARIWLSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAIFGLVAVYPIWNWRRLEMTMSYLRRELQRLADEPHLLPEAPRTRSVGGDVLERQMAL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH MAQAAQRVQDMKRFVWDSLDSMPEPIFVTDLAGTVLIANHAAKRYGSRLSLPLPEGRPLR HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHEEHHHHHHHCCCEECCCCCCCCCHH TALGELTFMKTVDGNAEHDVAIREHWPAVLDPTLEAEHDAMARGIEVRDRDGLDHLLRYA HHHHHHHEEEECCCCCCCCEEHHHCCCHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH ACTNAQGRVTGWIAGLVDVTELHAAERQREEALHLLSHDMRSPQSSILALVEIERDRAET HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEHHHHHHH DAMRGLLARIERYAHRALSLADEFVQLARAESQVYQLEATSLVDVLIDASDEVWPQAQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HIRVDTDVGTEMCWVRADRSLITRAFVNLLNNAVKYSPSATVITCTLAVEHASKRMFCTI EEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEE RDQGYGIAPEDQRHLFERFKRFHAGERPEISGSGLGMAFVKTVVTRHGGSVSVDSEVGVG ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCC TAVTVSLPAIDEPSA EEEEEEECCCCCCCC >Mature Secondary Structure MKPDSVSPRRRLGRRFLIEWIAIGCLGVAVILACAVGRMSASVDGLIYDRLLMLRSLPLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDVVVVDIDNQSVSALGRWPWPRDVHARLLDTLARAQPAAVVYDVLFTEPSPEDRAFADA CCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCHHHHHHH MTHVPTFLPVLLSPEQADGTRAVDPPVAALAARAVGLGHINLEVDRDGIVRSVALYESDG HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEECCC RVRWPQLMVPVYRAIQGGQLHPVGGAPGAHAHDLSRDATGEGRYLIPFSRNTPAYPTLSF CEECHHHHHHHHHHHCCCCEECCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCH DDVLEGRVKPDALRGKIVVVGVTASGLYDRFATPVSGEFGPLAGVYIHANVLDMLATGSA HHHHCCCCCCHHHCCEEEEEEECCHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCCC ISPASRAGLFVASLLPLAALLGGFLMLSPWRALLLTLSLAALSVVASMALLFEARIWLSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAIFGLVAVYPIWNWRRLEMTMSYLRRELQRLADEPHLLPEAPRTRSVGGDVLERQMAL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH MAQAAQRVQDMKRFVWDSLDSMPEPIFVTDLAGTVLIANHAAKRYGSRLSLPLPEGRPLR HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHEEHHHHHHHCCCEECCCCCCCCCHH TALGELTFMKTVDGNAEHDVAIREHWPAVLDPTLEAEHDAMARGIEVRDRDGLDHLLRYA HHHHHHHEEEECCCCCCCCEEHHHCCCHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH ACTNAQGRVTGWIAGLVDVTELHAAERQREEALHLLSHDMRSPQSSILALVEIERDRAET HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEHHHHHHH DAMRGLLARIERYAHRALSLADEFVQLARAESQVYQLEATSLVDVLIDASDEVWPQAQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HIRVDTDVGTEMCWVRADRSLITRAFVNLLNNAVKYSPSATVITCTLAVEHASKRMFCTI EEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEE RDQGYGIAPEDQRHLFERFKRFHAGERPEISGSGLGMAFVKTVVTRHGGSVSVDSEVGVG ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCC TAVTVSLPAIDEPSA EEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]