| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066054
Identifier: 78066054
GI number: 78066054
Start: 1559665
End: 1560279
Strand: Direct
Name: 78066054
Synonym: Bcep18194_A4583
Alternate gene names: NA
Gene position: 1559665-1560279 (Clockwise)
Preceding gene: 78066053
Following gene: 78066057
Centisome position: 42.22
GC content: 70.24
Gene sequence:
>615_bases ATGAGAAAGGAATGGGCAGCGACCGCGCTGGCGGCGTCGCTGTTGACGGGTTGCGCCGGCGTGACGAGCGGCGTGAGTGC GGTCGGGCAGCCGAACGCGTTTGCATCCGATGCGCACGGCTACGATTTCGTGCGGACGGCCGCGCAGGCCAATGATGCCG AATACCGGCAGATCGAGACGCTCGTGCGCGACGAACTCGCACACCGCGGCTTCGATGCGAAGCCGCTCGCGGCCGCGCGC TACCGATTGTCGATCGCGTATGCGACGCAGCCGGCCACGGTCGCGGCGATCGCGGACGGCTGCGGCGCCGCGAGCAGCGC ATGCGTGACGGTCGATGGGCCGGCGCCGTTCGCGCTGCCGTTCATGGGCCGCGTGTATCGCCATGTGCTGACGCTGCGCT TCGTCGACGCGAAATCGGGCGCCGACGTCTACCGCGTATCGGCCTCGCTGCGCGATCGCGATCCCGGCACGCAGCAGGCC GCGCCGGCGCTCGTGAAGAGCGCGCTCGCGAAGGTGCCGTTCGGCGACGGCGGCGGCTGGCTCGTCAAGACGAAAAAAGA CGACGCGGGCGGAATGCCGGGCGTCGTCTCGGTGAAGCCGGCCGAAGCGCGCTGA
Upstream 100 bases:
>100_bases GAGGTGGGTGTCGGCACCGCGGTGACGGTGTCGCTGCCCGCGATCGACGAGCCGTCCGCCTGACAGGGCCGGGCGCGACG GCAGGCATTTGGGGAAAGCC
Downstream 100 bases:
>100_bases GCGTCGGTCGGTGAGGTGAGGGCGGGCTCGCCGGAGCGAGCCCTGGCGCCCTTGCCGCGTTCAGTCGGCCGGGCGTCCGC CGTTGCGCGTGCGCAGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRKEWAATALAASLLTGCAGVTSGVSAVGQPNAFASDAHGYDFVRTAAQANDAEYRQIETLVRDELAHRGFDAKPLAAAR YRLSIAYATQPATVAAIADGCGAASSACVTVDGPAPFALPFMGRVYRHVLTLRFVDAKSGADVYRVSASLRDRDPGTQQA APALVKSALAKVPFGDGGGWLVKTKKDDAGGMPGVVSVKPAEAR
Sequences:
>Translated_204_residues MRKEWAATALAASLLTGCAGVTSGVSAVGQPNAFASDAHGYDFVRTAAQANDAEYRQIETLVRDELAHRGFDAKPLAAAR YRLSIAYATQPATVAAIADGCGAASSACVTVDGPAPFALPFMGRVYRHVLTLRFVDAKSGADVYRVSASLRDRDPGTQQA APALVKSALAKVPFGDGGGWLVKTKKDDAGGMPGVVSVKPAEAR >Mature_204_residues MRKEWAATALAASLLTGCAGVTSGVSAVGQPNAFASDAHGYDFVRTAAQANDAEYRQIETLVRDELAHRGFDAKPLAAAR YRLSIAYATQPATVAAIADGCGAASSACVTVDGPAPFALPFMGRVYRHVLTLRFVDAKSGADVYRVSASLRDRDPGTQQA APALVKSALAKVPFGDGGGWLVKTKKDDAGGMPGVVSVKPAEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21139; Mature: 21139
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKEWAATALAASLLTGCAGVTSGVSAVGQPNAFASDAHGYDFVRTAAQANDAEYRQIET CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH LVRDELAHRGFDAKPLAAARYRLSIAYATQPATVAAIADGCGAASSACVTVDGPAPFALP HHHHHHHHCCCCCCCHHHHHEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCHHH FMGRVYRHVLTLRFVDAKSGADVYRVSASLRDRDPGTQQAAPALVKSALAKVPFGDGGGW HHHHHHHHHHHHHEECCCCCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE LVKTKKDDAGGMPGVVSVKPAEAR EEEECCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MRKEWAATALAASLLTGCAGVTSGVSAVGQPNAFASDAHGYDFVRTAAQANDAEYRQIET CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH LVRDELAHRGFDAKPLAAARYRLSIAYATQPATVAAIADGCGAASSACVTVDGPAPFALP HHHHHHHHCCCCCCCHHHHHEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCHHH FMGRVYRHVLTLRFVDAKSGADVYRVSASLRDRDPGTQQAAPALVKSALAKVPFGDGGGW HHHHHHHHHHHHHEECCCCCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE LVKTKKDDAGGMPGVVSVKPAEAR EEEECCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA