| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is pilM [C]
Identifier: 78043775
GI number: 78043775
Start: 552407
End: 553438
Strand: Direct
Name: pilM [C]
Synonym: CHY_0639
Alternate gene names: 78043775
Gene position: 552407-553438 (Clockwise)
Preceding gene: 78044930
Following gene: 78044456
Centisome position: 23.0
GC content: 41.86
Gene sequence:
>1032_bases ATGGGGAAAAACCGGTATATTTTAGCTTTTGACGCGGGAGTGCGGTATTTTAAAGCTGTTTTACTTAAAGCTGACAAAAA GCAGCCGGAATTATTAAAAACGGTAACTTATCAGATGCCAGTGGAATTTCAGGAGAATACGGTTCGGGATTATATTCCCA AATATTTGCTGGCAGCCAAAAAAGAATTTAACATAGGAAAGGCTAAAGTTATAACTACTCTTCCCGGCAATAAAATTATT TCCCGCATCATCAAAGTTCCTTTAATGAACCAAAAAGAGTTAAATGCCTATCTTGACTTAGAAGCAGAGCAGTATTTACC AGTTCCCGTTAAAGATAGCGTTTTGGCTTCGGTAATTTTGGAAAATGCCGAGGCGGATGATGGAACCAAACAGATGAACG TTTTACTTTCCGCCGCTTCCCGGGAAATTATTATGGATCTTTACGATACGGTGGTTTCTACGGGCTTAAACTTGGATGTG ATTGATCTTCCTTTTCTGGCTTTATACCGGGGAGTTTTTTCCCAAATAAATCCGGAAGTGCCGGTGGCGGTAGTGGATAT TGGTGCTGGTAATACCCTGTTAATTATCGTTAAAGACGGAATTTTAAAATTTGTCCGTTCAATTAAATGGGGGGCCAATG CCATCACCCAGATGATTGCAACCAATATGAACCTTGACTTTGTCAAAGCGGAACAACTAAAGGAAGAGAAGGGTGAGCTT TTGGCGGCAGATGAGCAGGTGGTTGATCAGGAAAAATTAACTATTGATATAAGCATTCGCCAGGCAATATCAGAACTTAT TAACGAAATCCGCCGCAGTATAGATTTTTACCGTACCCAGGAGCGGGGGAATAACGTTGAGCGAATTTTAATTACCGGAG GAGGGAGTAAGTTAAAAGGACTAACCGAACTTTTTGAAAGCCAGCTTGACCTTGAAACCTTTACCTTTGCCCCGATGGTG GAGGAAAAACTTGACCCGGCTTTTACTTTAGCCTACGGCCTGGGACTCTGGGGGGTGGAAAGGGATGTATAA
Upstream 100 bases:
>100_bases AAATAAAAGTAGTGAAATTAAAATATTAGAGTGGAAAGAGCTTTACCAAGTTTTTTAGAAAAGGATGGAGGGCTAAGTGC AAAGTTTTATCGGGAAATTT
Downstream 100 bases:
>100_bases AGCTAACCTCCTTCCCCCGGAACTACAAAAAGATGTCGAAATTAACACGAAAAAACTTGCCATTTTGGCGGGGATTACTG CTTTAGTTACCATTATAATC
Product: type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Protein FtsA; Type Iv Pilus Assembly Protein Pilm; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Fimbrial Assembly Protein; General Secretion Pathway Protein L; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbrial Assembly Family Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; Actin-Like ATPase Involved In; Type IV Pilus Biogenesis Protein TapM; Pilus-Associated Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Tfp Pilus Assembly Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAKKEFNIGKAKVITTLPGNKII SRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDV IDLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKGLTELFESQLDLETFTFAPMV EEKLDPAFTLAYGLGLWGVERDV
Sequences:
>Translated_343_residues MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAKKEFNIGKAKVITTLPGNKII SRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDV IDLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKGLTELFESQLDLETFTFAPMV EEKLDPAFTLAYGLGLWGVERDV >Mature_342_residues GKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAKKEFNIGKAKVITTLPGNKIIS RIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVI DLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGELL AADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKGLTELFESQLDLETFTFAPMVE EKLDPAFTLAYGLGLWGVERDV
Specific function: This Protein May Be Involved In Anomalous Filament Growth (By Similarity). May Be A Component Of The Septum. It May Interact With Ftsz. [C]
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38391; Mature: 38260
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAK CCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KEFNIGKAKVITTLPGNKIISRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVIL HCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHCCCEEECCCCCCCCCCCCHHHHHHHHH ENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVIDLPFLALYRGVFSQINPEV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC PVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL CEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCE LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKG EECCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH LTELFESQLDLETFTFAPMVEEKLDPAFTLAYGLGLWGVERDV HHHHHHHHCCCHHEEECHHHHHHCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRDYIPKYLLAAK CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KEFNIGKAKVITTLPGNKIISRIIKVPLMNQKELNAYLDLEAEQYLPVPVKDSVLASVIL HCCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHCCCEEECCCCCCCCCCCCHHHHHHHHH ENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVIDLPFLALYRGVFSQINPEV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC PVAVVDIGAGNTLLIIVKDGILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGEL CEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCE LAADEQVVDQEKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKG EECCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH LTELFESQLDLETFTFAPMVEEKLDPAFTLAYGLGLWGVERDV HHHHHHHHCCCHHEEECHHHHHHCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA