Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77460681

Identifier: 77460681

GI number: 77460681

Start: 5032741

End: 5033499

Strand: Reverse

Name: 77460681

Synonym: Pfl01_4460

Alternate gene names: NA

Gene position: 5033499-5032741 (Counterclockwise)

Preceding gene: 77460684

Following gene: 77460672

Centisome position: 78.18

GC content: 59.55

Gene sequence:

>759_bases
ATGAATAAACTGCCTCAAATCACCCTGGCCTTCTGGGTCATGAAAATCTGCGCGACGACCCTGGGGGAAACCGCGGGGGA
TTTGTTGTCGATGACCCTTAACGTCGGCTACGCCATCAGCTCGCTGATCCTGATCAGCGTGTTTGTCCTGACCCTGATCA
CGCAATTGATGTCCAAGACCTACAAGCCGCTGCTGTACTGGATCGTGATCCTGTCGACCAGCACCGCCGGCACCACCATG
TCGGACTTCATGGATCGCACGCTGGAACTGGGTTACGCCACCGGTTCCATGATTCTGATCGCGATCCTGCTGGCGATCTT
CGCGGCATGGCGCCTGAGCGGCGACTCGCTCAACGTCACCAAGGTGCAGAGTTTTCGCGGCGAGATGTTCTACTGGATGG
CGATTCTGTTCTCCAACACCCTGGGCACCGCGCTCGGCGATTACCTGGCGGACGACTCGGGTCTGGGCTTTGCCGGTGGC
GCGCTGTTGATCGGCTCGGCGATTGGCGTAGTCGTGCTGCTCAAGTACTTCACGAAGATTTCGACGGTGGCGCTGTTCTG
GGTGGCGTTCGTGCTGACCCGGCCGTTTGGCGCGACCCTGGGCGACTTGATGACCAAGTCCCATGAGAAGGGCGGTCTGG
ACTTCGGCACCATCGGTTCGTCGGCGGTACTGGCGGGGATTCTGCTGGTGATGATCGTGGGCGCGTCTTATGCGCAGAAG
CGCTATGGCAGCAAACAGGGCGTTGCCGAATTGTCCTGA

Upstream 100 bases:

>100_bases
TTTTCATGGATTCCCGACCGGTTTTTCACCCGCGCAACGCCAGTCTGCCCTCGGCCATAAAGCCAAAAACCGGCCGTCAC
ACACTGGAGCGTTGCCCGCG

Downstream 100 bases:

>100_bases
TCGGGAAATCGGACAGGAAAGAAAACGCGCGAAGGTCTTGCACCTTCGCGCGTTTTTTTGTGATCAGTCAGTGACGATCC
GAGAATGTTTCTGCGTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSLILISVFVLTLITQLMSKTYKPLLYWIVILSTSTAGTTM
SDFMDRTLELGYATGSMILIAILLAIFAAWRLSGDSLNVTKVQSFRGEMFYWMAILFSNTLGTALGDYLADDSGLGFAGG
ALLIGSAIGVVVLLKYFTKISTVALFWVAFVLTRPFGATLGDLMTKSHEKGGLDFGTIGSSAVLAGILLVMIVGASYAQK
RYGSKQGVAELS

Sequences:

>Translated_252_residues
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSLILISVFVLTLITQLMSKTYKPLLYWIVILSTSTAGTTM
SDFMDRTLELGYATGSMILIAILLAIFAAWRLSGDSLNVTKVQSFRGEMFYWMAILFSNTLGTALGDYLADDSGLGFAGG
ALLIGSAIGVVVLLKYFTKISTVALFWVAFVLTRPFGATLGDLMTKSHEKGGLDFGTIGSSAVLAGILLVMIVGASYAQK
RYGSKQGVAELS
>Mature_252_residues
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSLILISVFVLTLITQLMSKTYKPLLYWIVILSTSTAGTTM
SDFMDRTLELGYATGSMILIAILLAIFAAWRLSGDSLNVTKVQSFRGEMFYWMAILFSNTLGTALGDYLADDSGLGFAGG
ALLIGSAIGVVVLLKYFTKISTVALFWVAFVLTRPFGATLGDLMTKSHEKGGLDFGTIGSSAVLAGILLVMIVGASYAQK
RYGSKQGVAELS

Specific function: Unknown

COG id: COG4705

COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26954; Mature: 26954

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSLILISVFVLTLITQLMSKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKPLLYWIVILSTSTAGTTMSDFMDRTLELGYATGSMILIAILLAIFAAWRLSGDSLNVT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
KVQSFRGEMFYWMAILFSNTLGTALGDYLADDSGLGFAGGALLIGSAIGVVVLLKYFTKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
STVALFWVAFVLTRPFGATLGDLMTKSHEKGGLDFGTIGSSAVLAGILLVMIVGASYAQK
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
RYGSKQGVAELS
HCCCCCCCCCCC
>Mature Secondary Structure
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSLILISVFVLTLITQLMSKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKPLLYWIVILSTSTAGTTMSDFMDRTLELGYATGSMILIAILLAIFAAWRLSGDSLNVT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
KVQSFRGEMFYWMAILFSNTLGTALGDYLADDSGLGFAGGALLIGSAIGVVVLLKYFTKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
STVALFWVAFVLTRPFGATLGDLMTKSHEKGGLDFGTIGSSAVLAGILLVMIVGASYAQK
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
RYGSKQGVAELS
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA